Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | BK219_RS05730 | Genome accession | NZ_CP018496 |
| Coordinates | 1094513..1095019 (-) | Length | 168 a.a. |
| NCBI ID | WP_002967690.1 | Uniprot ID | A0A7L9MC56 |
| Organism | Brucella melitensis strain BwIM_ITA_55 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1089513..1100019
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BK219_RS05700 (BK219_05790) | - | 1091581..1092210 (+) | 630 | WP_005973077.1 | MarC family protein | - |
| BK219_RS05705 (BK219_05795) | phnN | 1092301..1092879 (-) | 579 | WP_004685664.1 | phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN | - |
| BK219_RS05710 (BK219_05800) | phnF | 1093066..1093827 (+) | 762 | WP_004685665.1 | phosphonate metabolism transcriptional regulator PhnF | - |
| BK219_RS17535 | - | 1093970..1094357 (+) | 388 | Protein_1071 | hypothetical protein | - |
| BK219_RS05725 (BK219_05815) | - | 1094409..1094609 (+) | 201 | WP_002971429.1 | hypothetical protein | - |
| BK219_RS05730 (BK219_05820) | ssb | 1094513..1095019 (-) | 507 | WP_002967690.1 | single-stranded DNA-binding protein | Machinery gene |
| BK219_RS05735 (BK219_05825) | - | 1095587..1095787 (+) | 201 | WP_002964232.1 | hypothetical protein | - |
| BK219_RS05740 (BK219_05830) | uvrA | 1095918..1098842 (+) | 2925 | WP_004685666.1 | excinuclease ABC subunit UvrA | - |
| BK219_RS05745 (BK219_05835) | - | 1099029..1099304 (-) | 276 | WP_002964234.1 | HU family DNA-binding protein | - |
Sequence
Protein
Download Length: 168 a.a. Molecular weight: 18371.15 Da Isoelectric Point: 5.3476
>NTDB_id=208895 BK219_RS05730 WP_002967690.1 1094513..1095019(-) (ssb) [Brucella melitensis strain BwIM_ITA_55]
MAGSVNKVILVGNLGADPEIRRLNSGDMVANLRIATSESWRDRQTGERKDRTEWHSVVIFNENLAKVAEQYLKKGAKVYI
EGALQTRKWQDQNGNDRYSTEIVLQKFRGELQMLDSRSEGGEGRSFGGGGNRNQMSDYSGGGGDFGSSGPSSGSSGGFSR
DLDDEIPF
MAGSVNKVILVGNLGADPEIRRLNSGDMVANLRIATSESWRDRQTGERKDRTEWHSVVIFNENLAKVAEQYLKKGAKVYI
EGALQTRKWQDQNGNDRYSTEIVLQKFRGELQMLDSRSEGGEGRSFGGGGNRNQMSDYSGGGGDFGSSGPSSGSSGGFSR
DLDDEIPF
Nucleotide
Download Length: 507 bp
>NTDB_id=208895 BK219_RS05730 WP_002967690.1 1094513..1095019(-) (ssb) [Brucella melitensis strain BwIM_ITA_55]
ATGGCTGGTAGCGTCAACAAGGTCATTCTGGTCGGCAATCTTGGTGCAGATCCTGAAATTCGCCGCCTGAATTCCGGCGA
TATGGTTGCCAACCTGCGCATTGCAACCTCGGAAAGCTGGCGTGACCGCCAGACCGGCGAACGCAAGGATCGCACCGAAT
GGCACAGCGTCGTCATCTTCAATGAAAATCTCGCCAAGGTTGCCGAACAATATCTGAAGAAGGGCGCCAAGGTTTATATC
GAAGGCGCGCTCCAGACCCGCAAGTGGCAGGATCAAAACGGCAATGACCGTTATTCAACGGAAATCGTGCTGCAAAAATT
CCGTGGAGAGCTTCAAATGCTCGACAGCCGCAGCGAAGGCGGCGAGGGCCGTTCCTTCGGCGGTGGTGGCAACCGCAACC
AGATGTCGGATTATTCCGGCGGCGGTGGAGATTTCGGCTCATCCGGCCCATCTTCGGGCAGCAGCGGCGGTTTCTCGCGC
GATCTGGACGATGAAATTCCGTTCTGA
ATGGCTGGTAGCGTCAACAAGGTCATTCTGGTCGGCAATCTTGGTGCAGATCCTGAAATTCGCCGCCTGAATTCCGGCGA
TATGGTTGCCAACCTGCGCATTGCAACCTCGGAAAGCTGGCGTGACCGCCAGACCGGCGAACGCAAGGATCGCACCGAAT
GGCACAGCGTCGTCATCTTCAATGAAAATCTCGCCAAGGTTGCCGAACAATATCTGAAGAAGGGCGCCAAGGTTTATATC
GAAGGCGCGCTCCAGACCCGCAAGTGGCAGGATCAAAACGGCAATGACCGTTATTCAACGGAAATCGTGCTGCAAAAATT
CCGTGGAGAGCTTCAAATGCTCGACAGCCGCAGCGAAGGCGGCGAGGGCCGTTCCTTCGGCGGTGGTGGCAACCGCAACC
AGATGTCGGATTATTCCGGCGGCGGTGGAGATTTCGGCTCATCCGGCCCATCTTCGGGCAGCAGCGGCGGTTTCTCGCGC
GATCTGGACGATGAAATTCCGTTCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Glaesserella parasuis strain SC1401 |
48.947 |
100 |
0.554 |
| ssb | Vibrio cholerae strain A1552 |
49.711 |
100 |
0.512 |
| ssb | Neisseria meningitidis MC58 |
38.547 |
100 |
0.411 |
| ssb | Neisseria gonorrhoeae MS11 |
37.778 |
100 |
0.405 |