Detailed information NTG0208665

Bioinformatically predicted

Overview

• Name: ruvB
• Type: Machinery gene
• Locus tag: CQR34_RS07310
• Genome accession: NZ_CP023814
• Coordinates: 1242980..1244011 (-)
• Length: 343 a.a.
• NCBI ID: WP_002220958.1
• Uniprot ID: Q9JZ86
• Organism: Neisseria meningitidis strain M26417
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1237980..1249011

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CQR34_RS07285 (CQR34_07285)	-	1239371..1239985 (+)	615	WP_014575380.1	molybdenum cofactor guanylyltransferase	-
CQR34_RS07290 (CQR34_07290)	-	1240148..1240765 (+)	618	WP_002217135.1	riboflavin synthase	-
CQR34_RS07295 (CQR34_07295)	-	1240773..1241636 (+)	864	WP_002217136.1	ATP-binding protein	-
CQR34_RS07300 (CQR34_07300)	-	1241649..1242083 (-)	435	WP_002213489.1	Spy/CpxP family protein refolding chaperone	-
CQR34_RS07305 (CQR34_07305)	rpe	1242229..1242957 (+)	729	WP_002219237.1	ribulose-phosphate 3-epimerase	-
CQR34_RS07310 (CQR34_07310)	ruvB	1242980..1244011 (-)	1032	WP_002220958.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
CQR34_RS07315 (CQR34_07315)	-	1244093..1244401 (-)	309	WP_002217140.1	hypothetical protein	-
CQR34_RS07320 (CQR34_07320)	-	1244624..1245877 (-)	1254	WP_002220959.1	multifunctional CCA addition/repair protein	-
CQR34_RS07325 (CQR34_07325)	-	1245949..1247577 (-)	1629	WP_002224512.1	ABC-F family ATPase	-
CQR34_RS07330 (CQR34_07330)	-	1247727..1248101 (+)	375	WP_002220962.1	arsenate reductase	-

Sequence

Protein

• Length: 343 a.a.
• Molecular weight: 37660.13 Da
• Isoelectric Point: 5.0462

>NTDB_id=208665 CQR34_RS07310 WP_002220958.1 1242980..1244011(-) (ruvB) [Neisseria meningitidis strain M26417]
MLQTDNLTAAQPQRIVAAQTASAQEELLERALRPKTLDDYIGQDKAKEQLAIFIQAAKKRGEALDHVLLFGPPGLGKTTL
AHIIAKELGVNLRQTSGPVLERAGDLAALLTNLDPHDVLFIDEIHRLSPVVEEILYPALEDYRLDIMIGEGPAARSVKID
LPPFTLIGATTRAGMLTNPLRDRFGIVSRLEFYENRDLTTIVSRSAQLLQLDMSEEGAEEIAKRSRGTPRIANRLLRRVR
DFADVKNNGTIDGGIADAALSMLDVDAQGLDVMDRKFLEAVLHKFGGGPVGLDNVAAAIGESTDTIEDVIEPYLIQQGFL
QRTPRGRMATERAYLHFGLPVEK

Nucleotide

• Length: 1032 bp

>NTDB_id=208665 CQR34_RS07310 WP_002220958.1 1242980..1244011(-) (ruvB) [Neisseria meningitidis strain M26417]
ATGCTGCAAACCGACAACCTGACCGCCGCGCAACCGCAACGCATCGTTGCCGCCCAAACCGCCTCCGCACAGGAAGAACT
GCTCGAACGCGCCCTCCGCCCCAAAACGCTGGACGACTACATCGGGCAAGACAAAGCCAAAGAACAGCTTGCCATTTTCA
TCCAAGCCGCCAAAAAACGCGGCGAAGCACTCGACCACGTTTTGCTCTTCGGCCCGCCCGGACTGGGCAAAACCACACTG
GCGCACATCATCGCCAAAGAATTGGGCGTAAATTTGCGCCAAACCAGCGGCCCCGTCCTCGAACGCGCAGGCGACCTCGC
CGCCCTTTTGACCAACCTTGATCCGCACGATGTATTGTTCATCGACGAAATCCACCGCCTCAGCCCTGTTGTCGAAGAAA
TCCTCTATCCCGCGCTCGAAGACTACCGGCTCGACATTATGATAGGCGAAGGACCCGCCGCCCGTTCCGTCAAAATCGAC
CTGCCGCCCTTCACGCTCATCGGCGCGACCACCCGCGCCGGTATGCTGACCAATCCGTTGCGCGACCGCTTCGGCATCGT
CTCCCGCCTTGAGTTTTACGAAAACCGAGACCTTACCACCATCGTCAGCCGTTCGGCACAACTGTTGCAGCTCGATATGT
CCGAAGAAGGCGCGGAAGAAATCGCCAAACGCAGCCGCGGTACGCCGCGCATCGCCAACCGCCTGTTGCGACGCGTGCGC
GATTTCGCCGACGTGAAAAACAACGGCACAATCGACGGCGGCATCGCCGATGCCGCTTTAAGTATGCTGGACGTGGACGC
GCAGGGGCTGGACGTGATGGACAGGAAATTTCTCGAAGCCGTTTTGCACAAATTCGGCGGCGGCCCGGTCGGTTTGGACA
ATGTTGCCGCCGCCATCGGCGAATCTACAGACACCATCGAAGACGTTATCGAACCCTACCTTATCCAACAAGGCTTCCTG
CAACGCACCCCGCGCGGCAGGATGGCGACCGAACGCGCCTACCTGCATTTCGGGCTGCCCGTCGAAAAATAA

Domains

Predicted by InterProScan.

• RuvB C-terminal winged helix domain (WHD_RuvB) (268-337)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (32-190)

• RuvB AAA lid domain (AAA_lid_4) (193-266)

3D structure

• AlphaFold DB: Q9JZ86

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvB	Streptococcus pneumoniae TIGR4	63.376	91.545	0.58
ruvB	Streptococcus pneumoniae R6	63.376	91.545	0.58
ruvB	Streptococcus pneumoniae D39	63.376	91.545	0.58
ruvB	Bacillus subtilis subsp. subtilis str. 168	60.55	95.335	0.577
ruvB	Helicobacter pylori 26695	57.508	91.254	0.525
ruvB	Synechocystis sp. PCC 6803	54.573	95.627	0.522