Detailed information NTG0208198

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: BSL41_RS01295
• Genome accession: NZ_CP018347
• Coordinates: 205187..205648 (-)
• Length: 153 a.a.
• NCBI ID: WP_000250545.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain SWU02
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 200187..210648

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BSL41_RS01265	-	200498..201322 (-)	825	WP_000727904.1	membrane protein insertase YidC	-
BSL41_RS01270	rnpA	201297..201668 (-)	372	WP_000739246.1	ribonuclease P protein component	-
BSL41_RS12540	-	201685..201816 (-)	132	WP_000768904.1	hypothetical protein	-
BSL41_RS01275	-	201817..203007 (-)	1191	WP_000167766.1	acetate kinase	-
BSL41_RS01280	comYH	203058..204011 (-)	954	WP_000345119.1	class I SAM-dependent methyltransferase	Machinery gene
BSL41_RS01285	-	204072..204659 (-)	588	WP_000679774.1	class I SAM-dependent methyltransferase	-
BSL41_RS01290	comGG/cglG	204796..205209 (-)	414	WP_000265630.1	competence type IV pilus minor pilin ComGG	Machinery gene
BSL41_RS01295	comGF/cglF	205187..205648 (-)	462	WP_000250545.1	competence type IV pilus minor pilin ComGF	Machinery gene
BSL41_RS01300	comGE/cglE	205611..205913 (-)	303	WP_000413380.1	competence type IV pilus minor pilin ComGE	Machinery gene
BSL41_RS01305	comGD/cglD	205876..206280 (-)	405	WP_000588005.1	competence type IV pilus minor pilin ComGD	Machinery gene
BSL41_RS01310	comGC/cglC	206273..206599 (-)	327	WP_000738650.1	comG operon protein ComGC	Machinery gene
BSL41_RS01315	comGB/cglB	206601..207617 (-)	1017	WP_013193332.1	competence type IV pilus assembly protein ComGB	Machinery gene
BSL41_RS01320	comGA/cglA/cilD	207565..208506 (-)	942	WP_000249567.1	competence type IV pilus ATPase ComGA	Machinery gene
BSL41_RS01325	-	208582..208947 (-)	366	WP_000286415.1	DUF1033 family protein	-
BSL41_RS01330	-	209098..210156 (-)	1059	WP_000649468.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 153 a.a.
• Molecular weight: 17855.34 Da
• Isoelectric Point: 6.4832

>NTDB_id=208198 BSL41_RS01295 WP_000250545.1 205187..205648(-) (comGF/cglF) [Streptococcus pneumoniae strain SWU02]
MVQNSCWQSKSHKVKAFTLLESLLALLVISGGLLLFQAMSQLLISEVRYQQQSEQKEWLLFVDQLEAELDRSQFEKVEGN
RFYMKQDGKDIAIGKSKSDDFRKTDASGRGYQPMVYGLKSAQITEDNQLVHFRFQFQKGLEREFIYRVEKEES

Nucleotide

• Length: 462 bp

>NTDB_id=208198 BSL41_RS01295 WP_000250545.1 205187..205648(-) (comGF/cglF) [Streptococcus pneumoniae strain SWU02]
ATGGTTCAGAACAGTTGTTGGCAATCAAAGAGCCATAAGGTCAAGGCTTTTACCTTGTTAGAATCCCTGCTTGCCCTGCT
CGTCATCAGTGGAGGCTTACTCCTTTTTCAAGCTATGAGTCAGCTCCTCATTTCAGAAGTTCGCTACCAGCAACAAAGCG
AGCAAAAGGAGTGGCTCTTGTTTGTGGATCAACTTGAGGCAGAATTAGACCGTTCGCAGTTCGAAAAAGTGGAAGGCAAT
CGTTTCTATATGAAGCAAGATGGCAAGGACATCGCCATCGGTAAGTCAAAGTCAGACGATTTTCGTAAAACCGATGCTAG
TGGACGGGGGTATCAGCCTATGGTTTATGGCCTCAAATCAGCTCAGATTACAGAGGACAATCAACTGGTTCATTTTCGTT
TCCAGTTTCAAAAAGGCTTAGAAAGGGAGTTCATCTATCGTGTGGAAAAAGAAGAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (45-141)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae Rx1	93.464	100	0.935
comGF/cglF	Streptococcus pneumoniae D39	93.464	100	0.935
comGF/cglF	Streptococcus pneumoniae R6	93.464	100	0.935
comGF/cglF	Streptococcus pneumoniae TIGR4	93.464	100	0.935
comGF/cglF	Streptococcus mitis SK321	92.81	100	0.928
comGF/cglF	Streptococcus mitis NCTC 12261	91.503	100	0.915