Detailed information NTG0208125

Bioinformatically predicted

Overview

• Name: pilY2
• Type: Machinery gene
• Locus tag: BS103_RS16040
• Genome accession: NZ_CP018332
• Coordinates: 3326447..3326929 (-)
• Length: 160 a.a.
• NCBI ID: WP_001046423.1
• Uniprot ID: A0A9E9MD39
• Organism: Acinetobacter baumannii strain A1296
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3321447..3331929

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BS103_RS16005 (BS103_15990)	-	3321557..3322588 (+)	1032	WP_001189457.1	lipase secretion chaperone	-
BS103_RS16010 (BS103_15995)	-	3322703..3323644 (+)	942	WP_097355459.1	lipase family alpha/beta hydrolase	-
BS103_RS16015 (BS103_16000)	rplS	3323697..3324065 (-)	369	WP_000014562.1	50S ribosomal protein L19	-
BS103_RS16020 (BS103_16005)	trmD	3324273..3325013 (-)	741	WP_000464599.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
BS103_RS16025 (BS103_16010)	rimM	3325059..3325607 (-)	549	WP_000189236.1	ribosome maturation factor RimM	-
BS103_RS16030 (BS103_16015)	rpsP	3325627..3325878 (-)	252	WP_000260334.1	30S ribosomal protein S16	-
BS103_RS16035 (BS103_16020)	pilE	3326025..3326450 (-)	426	WP_005127886.1	type IV pilin protein	Machinery gene
BS103_RS16040 (BS103_16025)	pilY2	3326447..3326929 (-)	483	WP_001046423.1	type IV pilin protein	Machinery gene
BS103_RS16045 (BS103_16030)	pilY1	3326942..3330787 (-)	3846	WP_025469982.1	PilC/PilY family type IV pilus protein	Machinery gene
BS103_RS16050 (BS103_16035)	pilX	3330799..3331617 (-)	819	WP_000149376.1	PilX N-terminal domain-containing pilus assembly protein	Machinery gene

Sequence

Protein

• Length: 160 a.a.
• Molecular weight: 17575.84 Da
• Isoelectric Point: 8.4834

>NTDB_id=208125 BS103_RS16040 WP_001046423.1 3326447..3326929(-) (pilY2) [Acinetobacter baumannii strain A1296]
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAVKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNSAANGQTWVIRATTTDSRNFNFIAKNSGIRCQSLTVTAVDNDCGGTTTCNTCEANSEVWQ

Nucleotide

• Length: 483 bp

>NTDB_id=208125 BS103_RS16040 WP_001046423.1 3326447..3326929(-) (pilY2) [Acinetobacter baumannii strain A1296]
ATGAATAAATACTCTATTCTACGGTTCAATCAGGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGTTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAGATTACTGATGATACGACCACAGGTAATTTATTAACAAATTCTGCTGCTAATGGTCAAAC
ATGGGTAATTAGAGCAACCACAACAGATTCGAGAAATTTTAATTTTATTGCTAAAAATTCAGGTATACGTTGTCAAAGTT
TAACAGTTACAGCCGTTGATAATGATTGTGGTGGAACGACTACTTGTAATACATGTGAAGCGAACAGTGAGGTTTGGCAG
TGA

Domains

Predicted by InterproScan.

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (34-127)

• Prokaryotic N-terminal methylation motif (N_methyl) (10-32)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilY2	Acinetobacter baumannii D1279779	93.125	100	0.931
comE	Acinetobacter baylyi ADP1	38.953	100	0.419