Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | BSR55_RS20190 | Genome accession | NZ_CP018259 |
| Coordinates | 4260115..4260699 (-) | Length | 194 a.a. |
| NCBI ID | WP_004826134.1 | Uniprot ID | A0A0A8TNZ3 |
| Organism | Acinetobacter bereziniae strain XH901 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 4255115..4265699
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BSR55_RS20165 (BSR55_20170) | - | 4255746..4256669 (+) | 924 | WP_100886146.1 | LysR substrate-binding domain-containing protein | - |
| BSR55_RS20170 (BSR55_20175) | ahpC | 4256736..4257299 (-) | 564 | WP_009585469.1 | alkyl hydroperoxide reductase subunit C | - |
| BSR55_RS20175 (BSR55_20180) | - | 4257500..4257835 (+) | 336 | WP_042087865.1 | hypothetical protein | - |
| BSR55_RS20180 (BSR55_20185) | - | 4258004..4258879 (-) | 876 | WP_058967350.1 | AraC family transcriptional regulator | - |
| BSR55_RS20185 (BSR55_20190) | - | 4259062..4259967 (+) | 906 | WP_100886147.1 | DMT family transporter | - |
| BSR55_RS20190 (BSR55_20195) | ssb | 4260115..4260699 (-) | 585 | WP_004826134.1 | single-stranded DNA-binding protein | Machinery gene |
| BSR55_RS20195 (BSR55_20200) | - | 4260751..4262115 (-) | 1365 | WP_009585507.1 | MFS transporter | - |
| BSR55_RS20200 (BSR55_20205) | - | 4262255..4263337 (-) | 1083 | WP_171249373.1 | DUF475 domain-containing protein | - |
| BSR55_RS20205 (BSR55_20210) | tenA | 4263575..4264246 (+) | 672 | WP_005035207.1 | thiaminase II | - |
Sequence
Protein
Download Length: 194 a.a. Molecular weight: 21381.08 Da Isoelectric Point: 6.4839
>NTDB_id=207808 BSR55_RS20190 WP_004826134.1 4260115..4260699(-) (ssb) [Acinetobacter bereziniae strain XH901]
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSESWTDKNSGERKEQTEWHRIVLHNRLGEIAQQYLRKGSKVYIEG
SLRTRQWTDQNGQERYTTEIRGEQMQMLDNNRQQGEAGENGGYNQPRFNNNQQGGFNNNQGGGYNQGNQGGYGNAAPQGG
YGNGGNNVNQGFQSPKPQQAPATAPADLDDDLPF
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSESWTDKNSGERKEQTEWHRIVLHNRLGEIAQQYLRKGSKVYIEG
SLRTRQWTDQNGQERYTTEIRGEQMQMLDNNRQQGEAGENGGYNQPRFNNNQQGGFNNNQGGGYNQGNQGGYGNAAPQGG
YGNGGNNVNQGFQSPKPQQAPATAPADLDDDLPF
Nucleotide
Download Length: 585 bp
>NTDB_id=207808 BSR55_RS20190 WP_004826134.1 4260115..4260699(-) (ssb) [Acinetobacter bereziniae strain XH901]
ATGCGTGGTGTAAATAAAGTTATTTTAGTTGGTACTTTGGGTCGTGATCCTGAGACGAAAACATTCCCAAATGGGGGGTC
TCTCACTCAATTTTCAATAGCGACCAGTGAATCTTGGACAGATAAAAATTCCGGAGAAAGAAAAGAACAAACGGAATGGC
ATCGTATTGTGTTGCATAACCGCTTAGGTGAAATTGCGCAGCAATATTTACGTAAAGGCTCGAAAGTTTATATTGAGGGT
TCTTTACGTACACGTCAGTGGACAGATCAAAATGGTCAAGAACGCTACACAACGGAAATCCGTGGTGAGCAAATGCAGAT
GTTGGATAACAACCGTCAGCAAGGTGAAGCAGGTGAAAACGGGGGCTATAACCAACCACGTTTCAATAACAATCAACAAG
GTGGTTTTAATAACAACCAAGGTGGTGGTTATAATCAAGGCAACCAAGGTGGCTATGGCAATGCAGCTCCACAAGGTGGT
TATGGCAATGGTGGAAACAATGTTAATCAGGGTTTCCAGTCGCCTAAACCACAACAAGCGCCGGCAACTGCTCCAGCAGA
TTTAGATGATGATCTGCCGTTCTAG
ATGCGTGGTGTAAATAAAGTTATTTTAGTTGGTACTTTGGGTCGTGATCCTGAGACGAAAACATTCCCAAATGGGGGGTC
TCTCACTCAATTTTCAATAGCGACCAGTGAATCTTGGACAGATAAAAATTCCGGAGAAAGAAAAGAACAAACGGAATGGC
ATCGTATTGTGTTGCATAACCGCTTAGGTGAAATTGCGCAGCAATATTTACGTAAAGGCTCGAAAGTTTATATTGAGGGT
TCTTTACGTACACGTCAGTGGACAGATCAAAATGGTCAAGAACGCTACACAACGGAAATCCGTGGTGAGCAAATGCAGAT
GTTGGATAACAACCGTCAGCAAGGTGAAGCAGGTGAAAACGGGGGCTATAACCAACCACGTTTCAATAACAATCAACAAG
GTGGTTTTAATAACAACCAAGGTGGTGGTTATAATCAAGGCAACCAAGGTGGCTATGGCAATGCAGCTCCACAAGGTGGT
TATGGCAATGGTGGAAACAATGTTAATCAGGGTTTCCAGTCGCCTAAACCACAACAAGCGCCGGCAACTGCTCCAGCAGA
TTTAGATGATGATCTGCCGTTCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Glaesserella parasuis strain SC1401 |
50.98 |
100 |
0.536 |
| ssb | Vibrio cholerae strain A1552 |
44.776 |
100 |
0.464 |
| ssb | Neisseria gonorrhoeae MS11 |
38.889 |
100 |
0.397 |
| ssb | Neisseria meningitidis MC58 |
38.889 |
100 |
0.397 |