Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | GbCGDNIH7_RS06190 | Genome accession | NZ_CP018193 |
| Coordinates | 1347012..1347533 (-) | Length | 173 a.a. |
| NCBI ID | WP_011631927.1 | Uniprot ID | Q0BST4 |
| Organism | Granulibacter bethesdensis strain NIH7.1 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1342012..1352533
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GbCGDNIH7_RS06165 (GbCGDNIH7_1216) | - | 1342347..1342625 (+) | 279 | WP_072548529.1 | hypothetical protein | - |
| GbCGDNIH7_RS06175 (GbCGDNIH7_1217) | - | 1342886..1343389 (-) | 504 | WP_072549389.1 | peptidylprolyl isomerase | - |
| GbCGDNIH7_RS06180 (GbCGDNIH7_1218) | coaD | 1343482..1344033 (-) | 552 | WP_025286636.1 | pantetheine-phosphate adenylyltransferase | - |
| GbCGDNIH7_RS06185 (GbCGDNIH7_1219) | gyrA | 1344026..1346782 (-) | 2757 | WP_072549390.1 | DNA gyrase subunit A | - |
| GbCGDNIH7_RS06190 (GbCGDNIH7_1220) | ssb | 1347012..1347533 (-) | 522 | WP_011631927.1 | single-stranded DNA-binding protein | Machinery gene |
| GbCGDNIH7_RS06195 (GbCGDNIH7_1221) | uvrA | 1347701..1350571 (+) | 2871 | WP_072548530.1 | excinuclease ABC subunit UvrA | - |
| GbCGDNIH7_RS06200 (GbCGDNIH7_1223) | - | 1350890..1351096 (+) | 207 | WP_157693319.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 173 a.a. Molecular weight: 18563.35 Da Isoelectric Point: 6.4931
>NTDB_id=206977 GbCGDNIH7_RS06190 WP_011631927.1 1347012..1347533(-) (ssb) [Granulibacter bethesdensis strain NIH7.1]
MAGSVNKVILIGNLGRDPEVRNTQDGGKVVNFTLATSETWNDRASGERKERTEWHRVVVFNDRLADIAERYLRKGTKVYV
EGALQTRKWTDQAGQEKYTTEVVISRFRGEITMLDSRSGGEGAGEGGGYRSAPAQRAPSGGGSGFGGGSSRPASGGSGWE
PSHGGDLDDEIPF
MAGSVNKVILIGNLGRDPEVRNTQDGGKVVNFTLATSETWNDRASGERKERTEWHRVVVFNDRLADIAERYLRKGTKVYV
EGALQTRKWTDQAGQEKYTTEVVISRFRGEITMLDSRSGGEGAGEGGGYRSAPAQRAPSGGGSGFGGGSSRPASGGSGWE
PSHGGDLDDEIPF
Nucleotide
Download Length: 522 bp
>NTDB_id=206977 GbCGDNIH7_RS06190 WP_011631927.1 1347012..1347533(-) (ssb) [Granulibacter bethesdensis strain NIH7.1]
ATGGCTGGCAGTGTCAATAAGGTCATTCTGATCGGTAATCTCGGGCGCGACCCCGAAGTTCGCAATACCCAGGATGGCGG
CAAGGTGGTGAATTTTACGCTCGCGACCAGCGAAACGTGGAATGATCGTGCTTCCGGTGAGCGGAAAGAACGAACCGAAT
GGCATCGTGTGGTGGTCTTTAATGACCGGTTGGCGGATATCGCCGAACGCTATCTGCGCAAGGGCACCAAGGTCTATGTC
GAAGGGGCGCTTCAGACCAGAAAATGGACCGACCAGGCCGGACAGGAAAAATACACCACTGAGGTCGTGATCAGCCGCTT
CCGTGGTGAAATCACCATGCTGGACAGCCGTTCGGGCGGGGAAGGGGCTGGTGAAGGCGGTGGCTATCGGTCCGCTCCCG
CCCAGCGTGCGCCATCCGGCGGCGGCAGCGGATTTGGTGGTGGCAGCAGCCGCCCTGCATCCGGTGGCAGTGGATGGGAA
CCTTCTCATGGCGGCGATCTGGACGACGAAATTCCGTTCTGA
ATGGCTGGCAGTGTCAATAAGGTCATTCTGATCGGTAATCTCGGGCGCGACCCCGAAGTTCGCAATACCCAGGATGGCGG
CAAGGTGGTGAATTTTACGCTCGCGACCAGCGAAACGTGGAATGATCGTGCTTCCGGTGAGCGGAAAGAACGAACCGAAT
GGCATCGTGTGGTGGTCTTTAATGACCGGTTGGCGGATATCGCCGAACGCTATCTGCGCAAGGGCACCAAGGTCTATGTC
GAAGGGGCGCTTCAGACCAGAAAATGGACCGACCAGGCCGGACAGGAAAAATACACCACTGAGGTCGTGATCAGCCGCTT
CCGTGGTGAAATCACCATGCTGGACAGCCGTTCGGGCGGGGAAGGGGCTGGTGAAGGCGGTGGCTATCGGTCCGCTCCCG
CCCAGCGTGCGCCATCCGGCGGCGGCAGCGGATTTGGTGGTGGCAGCAGCCGCCCTGCATCCGGTGGCAGTGGATGGGAA
CCTTCTCATGGCGGCGATCTGGACGACGAAATTCCGTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Glaesserella parasuis strain SC1401 |
47.594 |
100 |
0.514 |
| ssb | Vibrio cholerae strain A1552 |
48.864 |
100 |
0.497 |
| ssb | Neisseria meningitidis MC58 |
42.935 |
100 |
0.457 |
| ssb | Neisseria gonorrhoeae MS11 |
42.935 |
100 |
0.457 |