Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEC/celB   Type   Machinery gene
Locus tag   BSR14_RS07935 Genome accession   NZ_CP018186
Coordinates   1731717..1733957 (-) Length   746 a.a.
NCBI ID   WP_013991033.1    Uniprot ID   A0AAP3Q6Q7
Organism   Streptococcus salivarius strain ICDC1     
Function   ssDNA transport into the cell (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1726717..1738957
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSR14_RS07915 (BSR14_07990) - 1727584..1728444 (-) 861 WP_004183173.1 methionyl aminopeptidase -
  BSR14_RS07920 (BSR14_07995) spxR 1728485..1729765 (-) 1281 WP_002884454.1 CBS-HotDog domain-containing transcription factor SpxR -
  BSR14_RS07925 (BSR14_08000) - 1729758..1730303 (-) 546 WP_013991031.1 GNAT family N-acetyltransferase -
  BSR14_RS07930 (BSR14_08005) - 1730369..1731631 (-) 1263 WP_013991032.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  BSR14_RS07935 (BSR14_08010) comEC/celB 1731717..1733957 (-) 2241 WP_013991033.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  BSR14_RS07940 (BSR14_08015) comEA 1733947..1734645 (-) 699 WP_013991034.1 helix-hairpin-helix domain-containing protein Machinery gene
  BSR14_RS07945 (BSR14_08020) - 1734753..1735508 (-) 756 WP_013991035.1 lysophospholipid acyltransferase family protein -
  BSR14_RS07950 (BSR14_08025) - 1735638..1736573 (+) 936 WP_045002039.1 polysaccharide deacetylase family protein -
  BSR14_RS07955 (BSR14_08030) - 1736623..1737387 (+) 765 WP_013991037.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  BSR14_RS07960 (BSR14_08035) - 1737391..1737660 (+) 270 WP_013991038.1 GIY-YIG nuclease family protein -

Sequence

Protein


Download         Length: 746 a.a.        Molecular weight: 84531.46 Da        Isoelectric Point: 9.8651

>NTDB_id=206797 BSR14_RS07935 WP_013991033.1 1731717..1733957(-) (comEC/celB) [Streptococcus salivarius strain ICDC1]
MWLKKAPINLFSLALLIAALYFTVFVTNVYAIGTFVFLMVCFLKHHWKNKAALKLVGIVGSFFLVYFLFLHHKATIQDKQ
APAEINQVTLVADTLSVNGEQLSAIGKAKGQTYQVFYRLKSEKEQHFFKTTSQTLVLKGKIKLSPATGQRNFQGFNYQSY
LASQGIYRMAQIERLDYVVSQKSLSPLAFFHQLRRRALVHIQTHFPSPMRHYMTGLLFGYLDKEFDEQSQLYTSLGIIHL
FALSGMQVGFFLGWFRYGLLRLGLPKDYLFIILLPFSLCYGLMTGWTASVLRSLIQSLLAEFGIKKLDNMGITLLLLFLF
LPHFLLTVGGVLSCSYAFLLCLFDFEEMSSLKKSICMSLVLSLGILPFLTYYYGTFQPVSLILTAIFSIVFDNFLLPVLT
VFFALSGLVIFSQINPLFEWMETFLTWIQSWIGQPLILGKPSLLQFSLMIAVLVMLFDFWKKPQFRICLLMIFGLLMVWV
KHPLTNEVTMVDVGQGDSIFLRSMKGDTILIDVGGKVTFGSKEKWQEGSQTSNAEKTLIPYLQARGVSQIDHLVLTHTDT
DHIGDLEEVAKRFKIKEICVSQGALTKPSFVKRLRTLKRPVHTLKAGDKLPMMGSKLQVLYPNKIGDGGNNDSIVLYGKL
LGSSFLFTGDLEKEGEEELMASYPTLRASVLKAGHHGSKGSSSEAFLDQLHPSLALVSAGENNRYKHPNDETLERFKQRH
IKVLRTDKDGAIRFKGWFKWSSETVR

Nucleotide


Download         Length: 2241 bp        

>NTDB_id=206797 BSR14_RS07935 WP_013991033.1 1731717..1733957(-) (comEC/celB) [Streptococcus salivarius strain ICDC1]
ATGTGGCTTAAAAAGGCTCCAATCAATCTTTTTTCCTTGGCTCTGTTAATAGCTGCTCTTTATTTTACGGTTTTTGTCAC
TAATGTTTATGCTATTGGGACTTTTGTCTTTCTTATGGTCTGTTTTTTGAAACATCATTGGAAGAATAAGGCTGCCCTAA
AGTTGGTGGGAATTGTAGGTAGTTTCTTTTTGGTCTACTTTTTATTCTTACACCACAAAGCTACCATACAAGATAAACAA
GCTCCTGCTGAAATCAATCAGGTGACTCTGGTTGCTGATACGTTATCGGTTAATGGTGAGCAATTATCAGCTATCGGAAA
GGCAAAGGGACAAACTTATCAGGTCTTTTACCGACTCAAATCTGAGAAGGAGCAGCATTTTTTTAAGACTACTAGCCAAA
CGCTGGTATTAAAGGGGAAAATAAAGTTATCCCCAGCAACTGGTCAACGTAATTTTCAAGGGTTCAATTATCAGTCTTAT
CTAGCCAGCCAAGGTATTTATCGAATGGCTCAGATTGAGCGCTTGGATTATGTGGTGTCTCAAAAATCTCTATCTCCCTT
AGCTTTTTTCCATCAATTGAGGAGAAGGGCTTTGGTTCATATCCAGACACATTTTCCTAGTCCTATGAGACACTATATGA
CAGGCCTACTCTTTGGGTATTTGGATAAGGAGTTCGATGAGCAGAGTCAGCTTTACACAAGCCTAGGTATTATTCATCTA
TTCGCACTTTCGGGGATGCAAGTGGGCTTTTTTCTGGGATGGTTTCGCTATGGACTCCTACGCTTGGGCCTTCCTAAAGA
TTATCTATTTATTATCTTGCTACCTTTTTCCTTATGCTATGGCTTAATGACAGGTTGGACAGCTTCAGTCCTACGTTCCC
TGATTCAAAGTTTGTTGGCGGAGTTTGGTATTAAAAAACTGGATAATATGGGAATAACCTTACTTCTATTGTTTCTCTTT
TTACCTCATTTTCTTTTAACAGTGGGAGGTGTTTTAAGTTGTTCCTATGCTTTTTTGTTGTGTTTGTTTGATTTTGAGGA
GATGTCATCTCTTAAAAAGTCAATCTGTATGAGCTTGGTATTGAGTCTTGGGATTTTGCCTTTTCTAACTTACTATTATG
GGACCTTTCAACCGGTGAGTTTAATTCTGACGGCGATATTTTCCATAGTCTTTGATAACTTTCTCTTGCCTGTCTTGACG
GTCTTCTTTGCCCTTTCAGGACTGGTAATCTTTTCCCAAATCAACCCACTTTTTGAATGGATGGAGACCTTTTTGACTTG
GATACAATCTTGGATAGGCCAGCCATTAATTTTAGGGAAACCTAGTTTGTTACAGTTTAGCTTGATGATAGCTGTATTGG
TTATGCTCTTTGATTTTTGGAAAAAGCCTCAGTTTAGGATTTGCCTTTTGATGATTTTTGGTCTTTTGATGGTCTGGGTC
AAACATCCTTTAACCAATGAGGTGACTATGGTTGACGTTGGTCAGGGAGATAGTATTTTTCTGAGGAGTATGAAAGGCGA
TACCATCCTAATTGATGTGGGTGGCAAGGTGACTTTCGGTTCAAAGGAAAAATGGCAGGAGGGGAGCCAGACGAGCAATG
CAGAGAAAACCTTGATTCCCTATCTACAGGCTAGAGGAGTGTCTCAAATTGATCACCTGGTCCTGACGCATACGGACACA
GACCATATTGGTGATTTGGAAGAAGTGGCCAAGAGGTTTAAGATTAAGGAAATCTGTGTCAGTCAGGGGGCTTTGACTAA
ACCTAGTTTTGTTAAAAGACTTCGGACCTTAAAACGACCAGTTCACACTCTAAAGGCTGGCGACAAATTACCCATGATGG
GAAGTAAGCTACAGGTTCTTTATCCCAATAAAATTGGTGATGGTGGTAACAACGATTCGATAGTTCTTTACGGAAAACTA
TTAGGAAGCAGTTTTTTGTTTACTGGTGATTTGGAAAAAGAAGGAGAGGAGGAGCTGATGGCCAGCTATCCAACTTTAAG
GGCAAGCGTCCTCAAAGCTGGACACCACGGTTCAAAAGGCTCATCGTCTGAAGCTTTTTTGGATCAGTTGCACCCCTCCC
TTGCACTTGTTTCAGCTGGTGAGAACAATCGTTATAAACATCCAAATGATGAAACATTAGAACGTTTTAAGCAACGTCAC
ATTAAGGTTTTACGAACAGATAAAGACGGAGCCATACGTTTTAAGGGTTGGTTTAAATGGTCAAGTGAAACTGTCCGATA
A

Domains

Predicted by InterproScan.

Domain of unknown function (DUF4131) (DUF4131)

(29-169)

Competence protein (Competence)

(216-462)

Metallo-beta-lactamase superfamily (Lactamase_B)

(492-694)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEC/celB Streptococcus mitis SK321

48.529

100

0.487
  comEC/celB Streptococcus mitis NCTC 12261

48.193

100

0.483
  comEC/celB Streptococcus pneumoniae Rx1

46.658

100

0.468
  comEC/celB Streptococcus pneumoniae D39

46.658

100

0.468
  comEC/celB Streptococcus pneumoniae R6

46.658

100

0.468
  comEC/celB Streptococcus pneumoniae TIGR4

46.524

100

0.466
  comEC Lactococcus lactis subsp. cremoris KW2

43.649

99.196

0.433

Multiple sequence alignment