Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | BRW62_RS02625 | Genome accession | NZ_CP018092 |
| Coordinates | 521856..522218 (+) | Length | 120 a.a. |
| NCBI ID | WP_099798163.1 | Uniprot ID | A0A2D2PZZ0 |
| Organism | Parathermosynechococcus lividus PCC 6715 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 516856..527218
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BRW62_RS02595 | - | 516865..517026 (+) | 162 | Protein_527 | transposase | - |
| BRW62_RS14565 | - | 517411..517920 (+) | 510 | WP_250644951.1 | LCP family protein | - |
| BRW62_RS14570 (BRW62_02515) | - | 517932..518783 (+) | 852 | WP_250644952.1 | LCP family protein | - |
| BRW62_RS02605 (BRW62_02520) | - | 518984..519757 (+) | 774 | WP_227517524.1 | energy-coupling factor ABC transporter permease | - |
| BRW62_RS02610 (BRW62_02525) | - | 519750..520058 (+) | 309 | WP_099798161.1 | energy-coupling factor ABC transporter substrate-binding protein | - |
| BRW62_RS02615 (BRW62_02530) | cbiQ | 520073..520738 (+) | 666 | WP_198406122.1 | cobalt ECF transporter T component CbiQ | - |
| BRW62_RS02620 (BRW62_02535) | - | 520868..521728 (+) | 861 | WP_099798162.1 | energy-coupling factor ABC transporter ATP-binding protein | - |
| BRW62_RS02625 (BRW62_02540) | pilH | 521856..522218 (+) | 363 | WP_099798163.1 | response regulator transcription factor | Machinery gene |
| BRW62_RS02630 (BRW62_02545) | - | 522199..523620 (-) | 1422 | WP_099798164.1 | DUF697 domain-containing protein | - |
| BRW62_RS02635 (BRW62_02550) | - | 523714..526731 (-) | 3018 | WP_099799804.1 | AAA family ATPase | - |
Sequence
Protein
Download Length: 120 a.a. Molecular weight: 13565.89 Da Isoelectric Point: 4.5967
>NTDB_id=205693 BRW62_RS02625 WP_099798163.1 521856..522218(+) (pilH) [Parathermosynechococcus lividus PCC 6715]
MATVMVVDDSPTLRAMIVEIMKEQRYEVIEAEDGLEAQEKIKAQCPDLIILDVVMPRMNGYELCRWVKGEPASQNVPVIM
CTTKSEDFDIHWGKKQGVDAYITKPFDPAQLIATVKKLLP
MATVMVVDDSPTLRAMIVEIMKEQRYEVIEAEDGLEAQEKIKAQCPDLIILDVVMPRMNGYELCRWVKGEPASQNVPVIM
CTTKSEDFDIHWGKKQGVDAYITKPFDPAQLIATVKKLLP
Nucleotide
Download Length: 363 bp
>NTDB_id=205693 BRW62_RS02625 WP_099798163.1 521856..522218(+) (pilH) [Parathermosynechococcus lividus PCC 6715]
ATGGCCACAGTCATGGTTGTTGATGACAGTCCTACCCTCCGGGCAATGATTGTCGAAATTATGAAGGAACAACGCTACGA
GGTTATTGAAGCTGAGGACGGCCTAGAAGCTCAAGAAAAAATCAAAGCGCAATGCCCGGATCTCATCATTCTCGACGTGG
TCATGCCCCGCATGAATGGTTATGAACTGTGCCGTTGGGTGAAGGGGGAGCCAGCCTCGCAGAATGTGCCAGTGATTATG
TGCACGACGAAAAGCGAAGACTTTGATATTCACTGGGGAAAAAAGCAAGGGGTCGATGCCTACATTACCAAGCCCTTTGA
CCCCGCTCAACTCATTGCAACGGTCAAAAAGCTTCTTCCCTAG
ATGGCCACAGTCATGGTTGTTGATGACAGTCCTACCCTCCGGGCAATGATTGTCGAAATTATGAAGGAACAACGCTACGA
GGTTATTGAAGCTGAGGACGGCCTAGAAGCTCAAGAAAAAATCAAAGCGCAATGCCCGGATCTCATCATTCTCGACGTGG
TCATGCCCCGCATGAATGGTTATGAACTGTGCCGTTGGGTGAAGGGGGAGCCAGCCTCGCAGAATGTGCCAGTGATTATG
TGCACGACGAAAAGCGAAGACTTTGATATTCACTGGGGAAAAAAGCAAGGGGTCGATGCCTACATTACCAAGCCCTTTGA
CCCCGCTCAACTCATTGCAACGGTCAAAAAGCTTCTTCCCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
53.782 |
99.167 |
0.533 |
| pilG | Acinetobacter baumannii strain A118 |
40.351 |
95 |
0.383 |
| micA | Streptococcus pneumoniae Cp1015 |
36.975 |
99.167 |
0.367 |
| vicR | Streptococcus mutans UA159 |
36.975 |
99.167 |
0.367 |