Detailed information NTG0205194

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: A2U20_RS11240
• Genome accession: NZ_CP018032
• Coordinates: 2335126..2336253 (+)
• Length: 375 a.a.
• NCBI ID: WP_021117639.1
• Uniprot ID: -
• Organism: Glaesserella parasuis D74
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 2330126..2341253

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A2U20_RS11215 (A2U20_11030)	selA	2330485..2331867 (-)	1383	WP_021111454.1	L-seryl-tRNA(Sec) selenium transferase	-
A2U20_RS11225 (A2U20_11040)	-	2332307..2333248 (-)	942	WP_021111453.1	hypothetical protein	-
A2U20_RS11230 (A2U20_11045)	rfaD	2333340..2334266 (-)	927	WP_021110191.1	ADP-glyceromanno-heptose 6-epimerase	-
A2U20_RS11235 (A2U20_11050)	def	2334278..2334790 (-)	513	WP_005712670.1	peptide deformylase	-
A2U20_RS11240 (A2U20_11055)	dprA	2335126..2336253 (+)	1128	WP_021117639.1	DNA-processing protein DprA	Machinery gene
A2U20_RS11245 (A2U20_11060)	-	2336306..2337142 (+)	837	WP_010787337.1	heme/hemin ABC transporter substrate-binding protein	-
A2U20_RS11250 (A2U20_11065)	-	2337142..2338128 (+)	987	WP_016528599.1	FecCD family ABC transporter permease	-
A2U20_RS11255 (A2U20_11070)	-	2338128..2338916 (+)	789	WP_021117638.1	heme ABC transporter ATP-binding protein	-
A2U20_RS11260 (A2U20_11075)	-	2339024..2339824 (+)	801	WP_021111449.1	ChaN family lipoprotein	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 41805.89 Da
• Isoelectric Point: 5.2505

>NTDB_id=205194 A2U20_RS11240 WP_021117639.1 2335126..2336253(+) (dprA) [Glaesserella parasuis D74]
MTHLTKLLALLQVPQLGAQRIGRLLSEVDFGEFCQYDKIALKQMGWNERQIQRWFNPEHKWIDQALQWAEQDQQRILTLF
DEDYPFLLKQISTAPPVLFVRGNIESLSLPQIAIVGSRDYSHYGEHWAGHFSAELVKYQLAVTSGLAIGIDGFCHQRAVN
ENGITIAVLGSGLDQVYPARHKKLAEQIVDTSGALVSEFFPSQPPIAENFPRRNRIISGLSLGTLVIEATVNSGSLITAR
YALEQGREVFALPNAVQNPYSEGCHKLIKEGALLVENIDDILEAIAWQRQSVHIQPSLFDTKPKQAVKSEPKFAKNLPEL
TACQQQLFEQISLEPISIDDLAKATDMAVETALIELLNLELLGVVKQVSGGYVIT

Nucleotide

• Length: 1128 bp

>NTDB_id=205194 A2U20_RS11240 WP_021117639.1 2335126..2336253(+) (dprA) [Glaesserella parasuis D74]
ATGACACATCTCACAAAATTATTAGCCCTGTTACAAGTGCCACAGCTTGGCGCACAACGTATCGGGCGGTTACTCTCGGA
AGTGGACTTTGGCGAATTTTGTCAATACGACAAAATCGCATTAAAGCAAATGGGCTGGAATGAACGGCAAATTCAGCGTT
GGTTTAATCCTGAGCATAAATGGATCGATCAGGCGTTGCAATGGGCGGAACAGGATCAGCAACGGATTTTAACCTTATTT
GACGAAGATTATCCTTTTTTACTGAAGCAGATCAGTACTGCTCCCCCTGTGCTTTTTGTGCGTGGGAATATTGAAAGTTT
ATCGTTACCGCAGATAGCCATCGTTGGCAGTCGAGATTATTCCCACTATGGTGAACACTGGGCTGGGCATTTTTCGGCGG
AATTAGTGAAATATCAGCTTGCTGTCACCAGTGGCTTAGCCATAGGCATAGATGGATTTTGCCATCAACGTGCGGTCAAT
GAAAACGGAATTACCATTGCGGTTCTAGGCAGTGGGCTAGACCAAGTCTATCCTGCCCGCCACAAAAAACTTGCGGAACA
AATCGTTGATACAAGCGGTGCATTAGTGTCGGAATTTTTCCCTAGCCAACCACCGATTGCTGAAAATTTCCCTAGACGAA
ATCGCATCATCAGCGGATTATCGCTCGGCACATTGGTTATTGAAGCCACGGTGAACAGTGGCTCGCTCATCACTGCTCGT
TATGCGTTAGAGCAAGGGAGAGAAGTCTTTGCATTGCCGAACGCAGTTCAAAACCCATATAGCGAAGGGTGCCATAAATT
GATTAAAGAAGGGGCATTACTGGTTGAAAATATTGACGACATTTTAGAAGCGATTGCGTGGCAACGGCAGTCAGTGCATA
TTCAACCAAGTCTATTTGATACGAAACCTAAACAAGCGGTGAAATCCGAACCCAAATTTGCAAAAAATCTACCTGAACTG
ACCGCTTGTCAGCAACAATTGTTTGAACAGATTAGCCTTGAGCCGATTAGCATTGATGATCTTGCCAAAGCGACGGATAT
GGCGGTAGAAACCGCATTAATTGAGCTGTTAAATTTGGAGTTGTTGGGTGTTGTGAAGCAGGTGAGTGGGGGGTATGTAA
TCACTTGA

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (313-371)

• DNA recombination-mediator protein A (DNA_processg_A) (69-276)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Glaesserella parasuis strain SC1401	97.067	100	0.971
dprA	Haemophilus influenzae Rd KW20	53.235	90.667	0.483
dprA	Vibrio campbellii strain DS40M4	46.381	99.467	0.461
dprA	Vibrio cholerae strain A1552	43.883	100	0.44
dprA	Legionella pneumophila strain ERS1305867	38.624	100	0.389