Detailed information
Bioinformatically predicted
Overview
| Name | comB7 | Type | Machinery gene |
| Locus tag | JHP_RS00200 | Genome accession | NC_000921 |
| Coordinates | 37757..37870 (+) | Length | 37 a.a. |
| NCBI ID | WP_001217877.1 | Uniprot ID | A0A1A9H2U2 |
| Organism | Helicobacter pylori J99 | ||
| Function | transformation-associated type IV transport system (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 32757..42870
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JHP_RS00175 (jhp0029) | - | 32798..35026 (+) | 2229 | WP_000357196.1 | AAA family ATPase | - |
| JHP_RS00180 (jhp0030) | panD | 35016..35369 (+) | 354 | WP_000142257.1 | aspartate 1-decarboxylase | - |
| JHP_RS00185 (jhp0031) | - | 35372..35674 (+) | 303 | WP_000347931.1 | YbaB/EbfC family nucleoid-associated protein | - |
| JHP_RS00190 (jhp0032) | - | 35674..36678 (+) | 1005 | WP_000468465.1 | PDZ domain-containing protein | - |
| JHP_RS00195 (jhp0033) | comB6 | 36686..37741 (+) | 1056 | WP_000679725.1 | P-type conjugative transfer protein TrbL | Machinery gene |
| JHP_RS00200 | comB7 | 37757..37870 (+) | 114 | WP_001217877.1 | hypothetical protein | Machinery gene |
| JHP_RS00205 (jhp0034) | comB8 | 37867..38610 (+) | 744 | WP_000660577.1 | type IV secretion system protein | Machinery gene |
| JHP_RS00210 (jhp0035) | comB9 | 38610..39596 (+) | 987 | WP_001878684.1 | TrbG/VirB9 family P-type conjugative transfer protein | Machinery gene |
| JHP_RS00215 (jhp0036) | comB10 | 39589..40719 (+) | 1131 | WP_001045766.1 | DNA type IV secretion system protein ComB10 | Machinery gene |
| JHP_RS00220 (jhp0037) | - | 40789..42201 (+) | 1413 | WP_000694964.1 | mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | - |
Sequence
Protein
Download Length: 37 a.a. Molecular weight: 4291.23 Da Isoelectric Point: 9.3572
>NTDB_id=20492 JHP_RS00200 WP_001217877.1 37757..37870(+) (comB7) [Helicobacter pylori J99]
MRIFFVIMGLVLFGCTSKVHEMKKSPCTLYENRLNLA
MRIFFVIMGLVLFGCTSKVHEMKKSPCTLYENRLNLA
Nucleotide
Download Length: 114 bp
>NTDB_id=20492 JHP_RS00200 WP_001217877.1 37757..37870(+) (comB7) [Helicobacter pylori J99]
ATGAGGATTTTTTTTGTTATTATGGGACTTGTGTTGTTTGGTTGCACCAGTAAGGTGCATGAGATGAAAAAAAGCCCTTG
TACCTTGTATGAAAACAGGTTAAATCTCGCATGA
ATGAGGATTTTTTTTGTTATTATGGGACTTGTGTTGTTTGGTTGCACCAGTAAGGTGCATGAGATGAAAAAAAGCCCTTG
TACCTTGTATGAAAACAGGTTAAATCTCGCATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comB7 | Helicobacter pylori P1 |
97.297 |
100 |
0.973 |