Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | PSJM300_02715 | Genome accession | CP003725 |
| Coordinates | 602479..603102 (+) | Length | 207 a.a. |
| NCBI ID | AFN76621.1 | Uniprot ID | - |
| Organism | Pseudomonas stutzeri DSM 10701 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 597479..608102
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PSJM300_02700 | - | 598234..600666 (-) | 2433 | AFN76618.1 | penicillin-binding protein 1A | - |
| PSJM300_02705 | comM | 600846..601910 (+) | 1065 | AFN76619.1 | type IV pilus assembly protein PilM | Machinery gene |
| PSJM300_02710 | - | 601910..602482 (+) | 573 | AFN76620.1 | type 4 fimbrial biogenesis protein PilN | - |
| PSJM300_02715 | pilO | 602479..603102 (+) | 624 | AFN76621.1 | type 4 fimbrial biogenesis protein PilO | Machinery gene |
| PSJM300_02720 | comL/pilP | 603099..603626 (+) | 528 | AFN76622.1 | type 4 fimbrial biogenesis protein PilP | Machinery gene |
| PSJM300_02725 | pilQ | 603680..605785 (+) | 2106 | AFN76623.1 | type 4 fimbrial biogenesis protein PilQ | Machinery gene |
| PSJM300_02730 | - | 605846..606334 (+) | 489 | AFN76624.1 | shikimate kinase | - |
| PSJM300_02735 | aroB | 606358..607458 (+) | 1101 | AFN76625.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 207 a.a. Molecular weight: 22990.27 Da Isoelectric Point: 4.7600
>NTDB_id=20449 PSJM300_02715 AFN76621.1 602479..603102(+) (pilO) [Pseudomonas stutzeri DSM 10701]
MSLADSMQSLRSVDLSDLDLNNIGSWPGPVKFISAVLLLVAVLGLGYYFHLSDLQVQLDSQKAQEETLKQQFSTKAFQAA
NLEAYKAQMAEMEASFGALLRQLPSDTEVPGLLEDITHTGLGSGLEFEEIKLQPEVAQQFYIELPIQIKVVGGYHDLATF
VSGVSSLPRIVTLHDFEIKPEKNETSSKLHMNILAKTYRYNDKGLQK
MSLADSMQSLRSVDLSDLDLNNIGSWPGPVKFISAVLLLVAVLGLGYYFHLSDLQVQLDSQKAQEETLKQQFSTKAFQAA
NLEAYKAQMAEMEASFGALLRQLPSDTEVPGLLEDITHTGLGSGLEFEEIKLQPEVAQQFYIELPIQIKVVGGYHDLATF
VSGVSSLPRIVTLHDFEIKPEKNETSSKLHMNILAKTYRYNDKGLQK
Nucleotide
Download Length: 624 bp
>NTDB_id=20449 PSJM300_02715 AFN76621.1 602479..603102(+) (pilO) [Pseudomonas stutzeri DSM 10701]
ATGAGTCTCGCCGATTCGATGCAGAGCCTGCGCAGTGTCGATCTTTCCGATCTGGACCTGAACAATATCGGCTCCTGGCC
GGGCCCCGTGAAGTTCATCAGCGCCGTGCTGTTGCTGGTTGCGGTGCTGGGACTTGGTTATTACTTCCACCTGAGTGATC
TGCAGGTCCAGCTCGATAGCCAGAAAGCCCAAGAAGAAACCTTGAAGCAACAGTTTTCGACCAAGGCCTTCCAGGCGGCG
AACCTCGAAGCCTACAAGGCCCAGATGGCCGAGATGGAGGCTTCTTTCGGCGCCCTCTTGCGTCAGTTGCCCAGCGATAC
GGAAGTGCCCGGCCTGTTGGAAGACATCACGCATACCGGATTGGGAAGTGGCTTGGAGTTCGAAGAGATCAAGTTGCAAC
CCGAAGTGGCACAGCAGTTTTATATCGAACTGCCGATACAGATTAAAGTTGTGGGTGGTTATCACGATCTTGCGACTTTC
GTGAGTGGCGTATCCAGCTTGCCGCGTATCGTCACACTGCACGACTTCGAGATAAAACCCGAGAAGAACGAGACTTCCTC
GAAGTTGCACATGAATATTCTGGCCAAGACTTATCGATATAACGACAAGGGGCTGCAGAAATGA
ATGAGTCTCGCCGATTCGATGCAGAGCCTGCGCAGTGTCGATCTTTCCGATCTGGACCTGAACAATATCGGCTCCTGGCC
GGGCCCCGTGAAGTTCATCAGCGCCGTGCTGTTGCTGGTTGCGGTGCTGGGACTTGGTTATTACTTCCACCTGAGTGATC
TGCAGGTCCAGCTCGATAGCCAGAAAGCCCAAGAAGAAACCTTGAAGCAACAGTTTTCGACCAAGGCCTTCCAGGCGGCG
AACCTCGAAGCCTACAAGGCCCAGATGGCCGAGATGGAGGCTTCTTTCGGCGCCCTCTTGCGTCAGTTGCCCAGCGATAC
GGAAGTGCCCGGCCTGTTGGAAGACATCACGCATACCGGATTGGGAAGTGGCTTGGAGTTCGAAGAGATCAAGTTGCAAC
CCGAAGTGGCACAGCAGTTTTATATCGAACTGCCGATACAGATTAAAGTTGTGGGTGGTTATCACGATCTTGCGACTTTC
GTGAGTGGCGTATCCAGCTTGCCGCGTATCGTCACACTGCACGACTTCGAGATAAAACCCGAGAAGAACGAGACTTCCTC
GAAGTTGCACATGAATATTCTGGCCAAGACTTATCGATATAACGACAAGGGGCTGCAGAAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Legionella pneumophila strain ERS1305867 |
45.876 |
93.72 |
0.43 |
| pilO | Acinetobacter baumannii D1279779 |
44.211 |
91.787 |
0.406 |
| comO/pilO | Acinetobacter baylyi ADP1 |
44.624 |
89.855 |
0.401 |