Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | BLM15_RS09675 | Genome accession | NZ_CP017946 |
| Coordinates | 1952939..1953490 (+) | Length | 183 a.a. |
| NCBI ID | WP_126112549.1 | Uniprot ID | - |
| Organism | Bosea sp. Tri-49 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1947939..1958490
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BLM15_RS09660 (BLM15_09565) | - | 1950029..1950454 (+) | 426 | WP_126112546.1 | hypothetical protein | - |
| BLM15_RS09665 (BLM15_09570) | - | 1950698..1951684 (+) | 987 | WP_126112547.1 | MBL fold metallo-hydrolase | - |
| BLM15_RS09670 (BLM15_09575) | - | 1951936..1952709 (+) | 774 | WP_126112548.1 | NAD kinase | - |
| BLM15_RS09675 (BLM15_09580) | ssb | 1952939..1953490 (+) | 552 | WP_126112549.1 | single-stranded DNA-binding protein | Machinery gene |
| BLM15_RS09680 (BLM15_09585) | - | 1953594..1954865 (-) | 1272 | WP_126112550.1 | 3-phosphoshikimate 1-carboxyvinyltransferase | - |
| BLM15_RS09685 (BLM15_09590) | - | 1954937..1955236 (-) | 300 | WP_126112551.1 | putative quinol monooxygenase | - |
| BLM15_RS09690 (BLM15_09595) | - | 1955330..1956187 (-) | 858 | WP_126112552.1 | ABC transporter permease subunit | - |
| BLM15_RS09695 (BLM15_09600) | - | 1956184..1957179 (-) | 996 | WP_206438621.1 | ABC transporter substrate-binding protein | - |
| BLM15_RS09700 (BLM15_09605) | - | 1957372..1958256 (-) | 885 | WP_126112553.1 | LysR family transcriptional regulator | - |
| BLM15_RS31820 | - | 1958369..1958484 (+) | 116 | Protein_1939 | hypothetical protein | - |
Sequence
Protein
Download Length: 183 a.a. Molecular weight: 19439.32 Da Isoelectric Point: 7.2060
>NTDB_id=204304 BLM15_RS09675 WP_126112549.1 1952939..1953490(+) (ssb) [Bosea sp. Tri-49]
MAGSVNKVILVGNLGRDPEVRRLGSGEPVVNLRIATSETWRDKQSGERKERTEWHSVVIFNENLAKVAEQYLKKGSKIYI
EGQLQTRKWQDQQGVEKYTTEIVLQRFRGELTILDSRGQGGDEFGGGSSGGGGYGDEGSSGGGSSFGRSSPVGGGSRQPA
MASGGGSSGGSRSSSHLDDDIPF
MAGSVNKVILVGNLGRDPEVRRLGSGEPVVNLRIATSETWRDKQSGERKERTEWHSVVIFNENLAKVAEQYLKKGSKIYI
EGQLQTRKWQDQQGVEKYTTEIVLQRFRGELTILDSRGQGGDEFGGGSSGGGGYGDEGSSGGGSSFGRSSPVGGGSRQPA
MASGGGSSGGSRSSSHLDDDIPF
Nucleotide
Download Length: 552 bp
>NTDB_id=204304 BLM15_RS09675 WP_126112549.1 1952939..1953490(+) (ssb) [Bosea sp. Tri-49]
ATGGCTGGTAGCGTCAACAAGGTCATTCTGGTCGGCAATCTCGGGCGCGACCCCGAGGTGCGGCGCCTCGGTAGCGGCGA
GCCGGTGGTCAATCTCAGGATCGCCACCTCGGAAACCTGGCGCGACAAGCAGTCGGGCGAGCGCAAGGAGCGCACCGAGT
GGCACTCCGTGGTGATCTTCAACGAGAACCTCGCCAAGGTCGCCGAGCAGTATCTGAAGAAGGGCTCGAAGATTTACATC
GAGGGCCAGCTGCAGACCCGCAAATGGCAGGATCAGCAGGGCGTCGAGAAGTACACCACCGAGATCGTGCTGCAGCGCTT
TCGCGGCGAACTCACCATCCTCGACAGCCGCGGTCAGGGCGGCGACGAGTTCGGTGGCGGCAGCAGCGGCGGTGGCGGCT
ATGGCGACGAAGGCTCGTCGGGCGGCGGCAGCTCCTTCGGCCGGTCGAGCCCGGTCGGCGGCGGCTCGCGCCAGCCGGCG
ATGGCGAGCGGTGGCGGCAGCAGCGGCGGCTCGCGTTCGTCGAGCCATCTCGACGACGATATCCCATTCTAG
ATGGCTGGTAGCGTCAACAAGGTCATTCTGGTCGGCAATCTCGGGCGCGACCCCGAGGTGCGGCGCCTCGGTAGCGGCGA
GCCGGTGGTCAATCTCAGGATCGCCACCTCGGAAACCTGGCGCGACAAGCAGTCGGGCGAGCGCAAGGAGCGCACCGAGT
GGCACTCCGTGGTGATCTTCAACGAGAACCTCGCCAAGGTCGCCGAGCAGTATCTGAAGAAGGGCTCGAAGATTTACATC
GAGGGCCAGCTGCAGACCCGCAAATGGCAGGATCAGCAGGGCGTCGAGAAGTACACCACCGAGATCGTGCTGCAGCGCTT
TCGCGGCGAACTCACCATCCTCGACAGCCGCGGTCAGGGCGGCGACGAGTTCGGTGGCGGCAGCAGCGGCGGTGGCGGCT
ATGGCGACGAAGGCTCGTCGGGCGGCGGCAGCTCCTTCGGCCGGTCGAGCCCGGTCGGCGGCGGCTCGCGCCAGCCGGCG
ATGGCGAGCGGTGGCGGCAGCAGCGGCGGCTCGCGTTCGTCGAGCCATCTCGACGACGATATCCCATTCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Glaesserella parasuis strain SC1401 |
44.898 |
100 |
0.481 |
| ssb | Vibrio cholerae strain A1552 |
47.802 |
99.454 |
0.475 |
| ssb | Neisseria gonorrhoeae MS11 |
39.344 |
100 |
0.393 |
| ssb | Neisseria meningitidis MC58 |
39.344 |
100 |
0.393 |