Detailed information    

insolico Bioinformatically predicted

Overview


Name   kpsS   Type   Regulator
Locus tag   BLD37_RS02395 Genome accession   NZ_CP017868
Coordinates   443224..444405 (+) Length   393 a.a.
NCBI ID   WP_057992590.1    Uniprot ID   A0A5T1ZLR7
Organism   Campylobacter coli strain MG1116     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 438224..449405
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BLD37_RS02380 (BLD37_02380) cysC 438940..439524 (+) 585 WP_002834054.1 adenylyl-sulfate kinase -
  BLD37_RS09555 - 439521..441164 (+) 1644 WP_225982203.1 hypothetical protein -
  BLD37_RS02390 (BLD37_02390) - 441200..443227 (+) 2028 WP_052778836.1 capsular polysaccharide biosynthesis protein -
  BLD37_RS02395 (BLD37_02395) kpsS 443224..444405 (+) 1182 WP_057992590.1 capsule biosynthesis protein Regulator
  BLD37_RS02400 (BLD37_02400) - 444474..445595 (+) 1122 WP_002779168.1 DUF829 domain-containing protein -
  BLD37_RS02405 (BLD37_02405) - 445592..446962 (+) 1371 WP_002783822.1 cytochrome P450 -
  BLD37_RS02410 (BLD37_02410) - 446959..447381 (+) 423 WP_002779166.1 hypothetical protein -
  BLD37_RS02415 (BLD37_02415) acpS 447384..447731 (-) 348 WP_002779165.1 holo-ACP synthase -
  BLD37_RS02420 (BLD37_02420) fliL 447731..448267 (-) 537 WP_002779164.1 flagellar basal body-associated protein FliL -

Sequence


Protein


Download         Length: 393 a.a.        Molecular weight: 46418.21 Da        Isoelectric Point: 10.0235

>NTDB_id=203389 BLD37_RS02395 WP_057992590.1 443224..444405(+) (kpsS) [Campylobacter coli strain MG1116]
MKFSDKIKKEFSGKTVLLLQGPVGTFFHRLAIKMKKNKTKVFKLNFNGGDFLFYPSGKRCKCDEKDLENFYESFFKEKKI
DAIVMYNDCRLIHAKAIKVAKGLGIGIWIFEEGYLRPYCITFEKDGVNANSSLPRDKNFYLSCNILTKESIKEIPGGFKF
MAFSTFLYWLFSFLLAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKFTEKKLNQKIYSLEKKYFLAILQVYNDTQIKYH
YKKSIEEFIEELILSFANHARAKSYLIFKHHPMDRGYRNYSKLINELSQKYHVEGRILYVHDTYLPTLLKKALGCITINS
TVGLSAILEGCPTKVCGNAFYNFEGLAYPKKLQFFWREAHAYKPNPSLVINFKNYLLNTNQFNGNFYKNSFLG

Nucleotide


Download         Length: 1182 bp        

>NTDB_id=203389 BLD37_RS02395 WP_057992590.1 443224..444405(+) (kpsS) [Campylobacter coli strain MG1116]
ATGAAATTTAGCGATAAGATTAAAAAAGAATTTAGCGGTAAAACTGTCTTGCTTTTACAAGGACCTGTAGGGACTTTTTT
TCACCGCCTTGCCATAAAGATGAAAAAAAATAAAACCAAAGTTTTTAAGCTTAATTTTAATGGAGGGGATTTTCTTTTCT
ATCCAAGTGGAAAAAGGTGCAAGTGCGACGAAAAGGATCTTGAAAATTTTTATGAGAGCTTTTTTAAAGAAAAAAAGATA
GATGCTATTGTGATGTATAATGATTGCCGTTTGATCCATGCAAAAGCTATCAAAGTAGCTAAGGGGCTTGGCATTGGTAT
TTGGATTTTTGAAGAGGGGTATTTAAGGCCTTATTGTATCACTTTTGAAAAAGATGGGGTCAATGCAAACTCCTCCTTGC
CTCGCGATAAAAATTTCTATCTTTCTTGCAATATCCTTACAAAAGAAAGCATAAAAGAAATTCCAGGTGGTTTTAAATTT
ATGGCCTTTAGTACTTTTCTGTATTGGCTTTTTTCTTTTCTGCTAGCTCCTTTTTTTAACAACAAGCTTCATCATCGCAC
CTTATATCCTTTTGAATTTTTATTTTGGTTTAGATCTTTATATAGAAAATACCTTTATAAATTCACAGAAAAAAAACTCA
ATCAAAAAATTTATAGCCTTGAAAAAAAGTATTTTTTGGCTATTTTGCAAGTTTATAATGATACGCAAATTAAGTACCAT
TATAAAAAAAGCATAGAAGAATTTATAGAAGAGCTTATCCTTTCTTTTGCAAATCACGCAAGAGCAAAGTCTTATCTTAT
CTTTAAACATCATCCTATGGATAGGGGATATAGAAATTATTCTAAACTTATAAATGAGCTAAGCCAAAAATACCATGTAG
AAGGAAGAATTTTATATGTGCACGATACTTATTTACCCACTCTTTTAAAAAAGGCTTTGGGTTGCATCACGATTAATTCT
ACAGTGGGTTTAAGTGCTATTTTAGAGGGTTGTCCTACTAAGGTTTGTGGAAATGCATTTTACAATTTTGAAGGCCTAGC
TTATCCAAAAAAACTTCAATTTTTTTGGCGCGAAGCTCATGCTTATAAACCCAATCCTAGCTTGGTTATAAATTTTAAAA
ATTATCTTTTAAATACAAATCAATTCAACGGCAATTTTTACAAAAATTCGTTTTTAGGTTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A5T1ZLR7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

88.265

99.746

0.88


Multiple sequence alignment