Detailed information NTG0202946

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: CJZ71_RS04475
• Genome accession: NZ_CP022891
• Coordinates: 782107..782712 (-)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis strain DKU_NT_03
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 777107..787712

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CJZ71_RS04445 (CJZ71_04445)	-	777920..778309 (+)	390	WP_014477528.1	TIGR04086 family membrane protein	-
CJZ71_RS04450 (CJZ71_04450)	yajC	778366..778632 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
CJZ71_RS04455 (CJZ71_04455)	tgt	778669..779814 (-)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
CJZ71_RS04460 (CJZ71_04460)	queA	779841..780869 (-)	1029	WP_003229723.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
CJZ71_RS04465 (CJZ71_04465)	yrzS	780899..781099 (-)	201	WP_003222669.1	DUF2905 domain-containing protein	-
CJZ71_RS04470 (CJZ71_04470)	ruvB	781092..782096 (-)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
CJZ71_RS04475 (CJZ71_04475)	ruvA	782107..782712 (-)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
CJZ71_RS04480 (CJZ71_04480)	bofC	782851..783363 (-)	513	WP_003229715.1	sporulation cell-cell signaling protein BofC	-
CJZ71_RS04485 (CJZ71_04485)	csbX	783411..784718 (-)	1308	WP_003246197.1	MFS transporter	-
CJZ71_RS04490 (CJZ71_04490)	iolG	784789..785817 (-)	1029	WP_015251559.1	inositol 2-dehydrogenase	-
CJZ71_RS04495 (CJZ71_04495)	yrzF	786055..786702 (+)	648	WP_024572252.1	phosphotransferase	-
CJZ71_RS22350	-	786748..786870 (-)	123	WP_003229707.1	hypothetical protein	-
CJZ71_RS22810	-	786955..787029 (+)	75	Protein_897	hypothetical protein	-
CJZ71_RS22355	-	787033..787401 (+)	369	WP_186437837.1	DUF5412 family protein	-
CJZ71_RS04505 (CJZ71_04505)	-	787408..787548 (+)	141	WP_004398683.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=202946 CJZ71_RS04475 WP_003229717.1 782107..782712(-) (ruvA) [Bacillus subtilis strain DKU_NT_03]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=202946 CJZ71_RS04475 WP_003229717.1 782107..782712(-) (ruvA) [Bacillus subtilis strain DKU_NT_03]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAAGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTATGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAAGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408