Detailed information NTG0202921

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: BK049_RS10855
• Genome accession: NZ_CP017786
• Coordinates: 2153428..2154603 (+)
• Length: 391 a.a.
• NCBI ID: WP_008360205.1
• Uniprot ID: A0AAC9NCV1
• Organism: Bacillus xiamenensis strain VV3
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 2148428..2159603

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BK049_RS10835 (BK049_10835)	-	2149585..2150652 (+)	1068	WP_071168499.1	MraY family glycosyltransferase	-
BK049_RS18890	-	2150710..2151349 (-)	640	Protein_2109	IS3 family transposase	-
BK049_RS10845 (BK049_10845)	-	2151464..2152555 (-)	1092	WP_008360210.1	LCP family protein	-
BK049_RS10850 (BK049_10850)	-	2152540..2153208 (-)	669	WP_008360208.1	YigZ family protein	-
BK049_RS10855 (BK049_10855)	degS	2153428..2154603 (+)	1176	WP_008360205.1	sensor histidine kinase	Regulator
BK049_RS10860 (BK049_10860)	degU	2154668..2155357 (+)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
BK049_RS10865 (BK049_10865)	-	2155570..2156412 (+)	843	WP_071168501.1	DegV family protein	-
BK049_RS10870 (BK049_10870)	comFA	2156532..2157911 (+)	1380	WP_145939407.1	DEAD/DEAH box helicase	Machinery gene
BK049_RS10875 (BK049_10875)	-	2157976..2158269 (+)	294	WP_008360197.1	competence protein ComFB	-
BK049_RS19975	-	2158266..2158433 (+)	168	Protein_2117	double zinc ribbon domain-containing protein	-
BK049_RS19820	comFC	2158596..2158952 (+)	357	WP_237739228.1	phosphoribosyltransferase family protein	Machinery gene
BK049_RS10885 (BK049_10885)	-	2159009..2159428 (+)	420	WP_008360193.1	TIGR03826 family flagellar region protein	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45523.25 Da
• Isoelectric Point: 5.8757

>NTDB_id=202921 BK049_RS10855 WP_008360205.1 2153428..2154603(+) (degS) [Bacillus xiamenensis strain VV3]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCIGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=202921 BK049_RS10855 WP_008360205.1 2153428..2154603(+) (degS) [Bacillus xiamenensis strain VV3]
ATGACAACACCTAAAATGGATCCGAAATTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGTAAGGA
CGAAGTATTTAGAATAGGCGAGCAGTCCCGTCAACAATATGAAAGCCTAGTAGAAGAGCTTAAACAAATCAAACAGCAAG
TAAATGAAGTAATTGATTTTGGTGATAAACTAGAAGTACATACGAGACATGCTAGAAACCGATTATCTGAGGTCAGCAGA
AACTTCAACAAATTCAGTGAAGAAGAAATTCGAGAAGCCTACGAAAAAGCGCATAATCTGCAAGTAGAACTCACCATGAT
CCAGCAGCGTGAAAAGCAGCTGAGGGAAAGAAGAGACGATCTAGAAAGACGATTACTAAGCTTACAAGACGTCATTGAAC
GTTCAGAAACACTTGTGAGCCAGATCACGGTCGTCCTCAACTACCTAAACCAAGATTTACGCCAAGTCGGCGTTTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGACTAAGAATTATTGAAGCCCAAGAAGAAGAGCGCAAAAGGGTATCACGGGA
AATACATGATGGGCCTGCTCAGATGCTGGCAAATGTAATGATGCGTTCTGAATTAATTGAACGAATTTTTAGAGACCGTG
GAACAGAAGAAGGCTTTAAAGAAATTAGAAGTCTTAGACAGAATGTGCGAAATGCACTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTAGGTCTCATTCCGACGCTAAGAAAGTACTTAAACACAATTGAAGAGTA
CGATGGGAAAACCAAGATTACGTTCCAGTGCATTGGTGATACAGAAAGCGAAAGAATCGCTTCTCAATTTGAAGTGGCAC
TATTTAGACTAGCCCAAGAAGCTGTCACAAATTCATTAAAGCATTCTGAAGCTGAAGAAATCTCTGTGAAGGTTGAAGTA
ACGAAAGACTTTGTGACCTTAATTATCAAAGACGATGGAAAAGGCTTTGATATGAAAGATGTGAAAACAAATAAAAACAA
ATCATTCGGGTTACTTGGTATGAAAGAACGCGTTGACTTACTAGAAGGTAAAATGACCATTGACTCAAAAATAGGTCTAG
GGACATTCATTATGATTAGAGTGCCGTTAACATTACAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.714	98.465	0.844