Detailed information NTG0202478

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: BI197_RS16090
• Genome accession: NZ_CP017747
• Coordinates: 3354790..3355953 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain SYBC H47
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3349790..3360953

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BI197_RS16060	-	3350055..3350474 (-)	420	WP_003151392.1	TIGR03826 family flagellar region protein	-
BI197_RS16065	comFC	3350548..3351237 (-)	690	WP_199445943.1	phosphoribosyltransferase family protein	Machinery gene
BI197_RS16070	-	3351243..3351527 (-)	285	WP_017418816.1	late competence development ComFB family protein	-
BI197_RS16075	comFA	3351585..3352970 (-)	1386	WP_071392364.1	DEAD/DEAH box helicase	Machinery gene
BI197_RS16080	-	3353078..3353926 (-)	849	WP_071392365.1	DegV family protein	-
BI197_RS16085	degU	3354024..3354713 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
BI197_RS16090	degS	3354790..3355953 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
BI197_RS16095	-	3356176..3356823 (+)	648	WP_060657503.1	YigZ family protein	-
BI197_RS16100	-	3356828..3358003 (+)	1176	WP_071392366.1	LCP family protein	-
BI197_RS16105	-	3358093..3359169 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
BI197_RS16110	tuaH	3359302..3360498 (-)	1197	WP_071392367.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=202478 BI197_RS16090 WP_003151385.1 3354790..3355953(-) (degS) [Bacillus velezensis strain SYBC H47]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=202478 BI197_RS16090 WP_003151385.1 3354790..3355953(-) (degS) [Bacillus velezensis strain SYBC H47]
ATGAACAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATCGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948