Detailed information NTG0020231

Bioinformatically predicted

Overview

• Name: comYH
• Type: Machinery gene
• Locus tag: SPG_1959
• Genome accession: CP001015
• Coordinates: 1859064..1860017 (-)
• Length: 317 a.a.
• NCBI ID: ACF56004.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae G54
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1854064..1865017

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SPG_1953	-	1854825..1855448 (-)	624	ACF55028.1	conserved hypothetical protein	-
SPG_1954	-	1855499..1856485 (-)	987	ACF56836.1	hypothetical protein	-
SPG_1955	-	1856504..1857328 (-)	825	ACF56295.1	SpoIIIJ family protein	-
SPG_1956	rnpA	1857303..1857674 (-)	372	ACF55368.1	ribonuclease P protein component	-
SPG_1957	-	1857691..1857822 (-)	132	ACF54788.1	conserved hypothetical protein	-
SPG_1958	ackA	1857823..1859013 (-)	1191	ACF56573.1	acetate kinase	-
SPG_1959	comYH	1859064..1860017 (-)	954	ACF56004.1	conserved hypothetical protein	Machinery gene
SPG_1960	-	1860078..1860458 (-)	381	ACF56765.1	hypothetical protein	-
SPG_1961	-	1860490..1860672 (-)	183	ACF55149.1	conserved hypothetical protein	-
SPG_1962	comGG/cglG	1860809..1861222 (-)	414	ACF54761.1	conserved hypothetical protein	Machinery gene
SPG_1963	comGF/cglF	1861200..1861661 (-)	462	ACF55334.1	conserved hypothetical protein	Machinery gene
SPG_1964	comGE/cglE	1861624..1861926 (-)	303	ACF56096.1	hypothetical protein	Machinery gene
SPG_1965	comGD/cglD	1861889..1862293 (-)	405	ACF56539.1	competence protein CglD	Machinery gene
SPG_1966	comGC/cglC	1862286..1862612 (-)	327	ACF55098.1	competence protein CglC	Machinery gene
SPG_1967	comGB/cglB	1862614..1863630 (-)	1017	ACF55582.1	competence protein CglB	Machinery gene
SPG_1968	comGA/cglA/cilD	1863578..1864519 (-)	942	ACF55208.1	competence protein CglA	Machinery gene
SPG_1969	-	1864595..1864960 (-)	366	ACF55572.1	conserved hypothetical protein	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35717.95 Da
• Isoelectric Point: 4.2995

>NTDB_id=20231 SPG_1959 ACF56004.1 1859064..1860017(-) (comYH) [Streptococcus pneumoniae G54]
MDFEKIEQAYTYLLENVQVIQSDLATNFYDALVEQNSIYLDGETELEQVKDNNQTLKRLALRKEEWLKTYQFLLMKAGQT
EPLQANHQFTPDAIALLLVFIVEELFKEEEITILEMGSGMGILGATFLTSLTKKVDYLGMEVDDLLIDLAASMADVIGLQ
AGFVQGDAVRPQMLKESDVVISDLPVGYYPDDAVASRHQVASSQEHTYTHHLLMEQGLKYLKSDGYAIFLAPSDLLTSPQ
SNLLKVWLKEEASLVAMISLPENLFANAKQSKTIFILQKKSEIAVEPFVYPLASLQDASVLMKFKENFQKWTQGTEI

Nucleotide

• Length: 954 bp

>NTDB_id=20231 SPG_1959 ACF56004.1 1859064..1860017(-) (comYH) [Streptococcus pneumoniae G54]
ATGGATTTTGAAAAAATTGAACAAGCTTATACCTATTTACTAGAGAATGTCCAAGTCATCCAAAGTGATTTGGCGACCAA
CTTTTATGACGCCTTGGTGGAGCAAAACAGCATCTATCTGGATGGTGAGACTGAGCTAGAACAGGTCAAAGACAACAATC
AGACCCTTAAGCGTTTAGCACTACGCAAAGAAGAATGGCTCAAGACCTACCAGTTTCTCTTGATGAAGGCTGGGCAAACA
GAACCCTTGCAGGCCAATCACCAGTTTACACCGGATGCTATTGCTTTACTTTTGGTGTTTATTGTGGAAGAGCTGTTTAA
AGAGGAGGAAATTACTATCCTCGAAATGGGTTCTGGGATGGGAATTTTGGGCGCTACTTTCTTGACCTCGCTTACTAAAA
AGGTGGATTATTTGGGAATGGAAGTGGATGATTTGCTGATTGATTTGGCAGCTAGCATGGCAGATGTAATTGGTTTGCAG
GCTGGCTTTGTCCAAGGAGATGCCGTTCGTCCACAAATGCTCAAAGAAAGTGATGTGGTCATCAGCGACTTGCCTGTTGG
CTATTATCCTGATGATGCCGTTGCGTCGCGCCATCAAGTTGCTTCTAGTCAAGAACATACTTACACCCATCACTTGCTCA
TGGAACAAGGACTTAAGTACCTCAAGTCAGACGGATACGCTATTTTTCTAGCTCCGAGTGATTTGTTGACCAGTCCTCAA
AGTAATTTGTTGAAAGTCTGGTTGAAAGAGGAGGCAAGTCTGGTTGCTATGATTAGTTTACCTGAAAATCTCTTTGCTAA
TGCTAAACAATCTAAGACTATTTTTATCCTACAGAAGAAAAGTGAAATAGCAGTAGAGCCTTTTGTTTATCCACTTGCTA
GCTTGCAAGATGCAAGTGTTTTAATGAAATTTAAAGAAAATTTTCAAAAATGGACTCAAGGTACTGAAATATAA

Domains

Predicted by InterproScan.

• N-6 DNA Methylase (N6_Mtase) (69-282)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYH	Streptococcus mutans UA140	54.633	98.738	0.539
comYH	Streptococcus mutans UA159	54.313	98.738	0.536