Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilG   Type   Regulator
Locus tag   BKP64_RS16255 Genome accession   NZ_CP017715
Coordinates   3518517..3518909 (-) Length   130 a.a.
NCBI ID   WP_008175635.1    Uniprot ID   G6YWX8
Organism   Marinobacter salinus strain Hb8     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 3513517..3523909
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BKP64_RS16235 (BKP64_16235) - 3514461..3515360 (-) 900 WP_070972497.1 CheR family methyltransferase -
  BKP64_RS16240 (BKP64_16240) - 3515388..3517463 (-) 2076 WP_070972500.1 methyl-accepting chemotaxis protein -
  BKP64_RS16245 (BKP64_16245) - 3517556..3518101 (-) 546 WP_070972502.1 chemotaxis protein CheW -
  BKP64_RS16250 (BKP64_16250) pilH 3518122..3518484 (-) 363 WP_070972503.1 twitching motility response regulator PilH -
  BKP64_RS16255 (BKP64_16255) pilG 3518517..3518909 (-) 393 WP_008175635.1 twitching motility response regulator PilG Regulator
  BKP64_RS16260 (BKP64_16260) gshB 3519206..3520168 (+) 963 WP_083329245.1 glutathione synthase -
  BKP64_RS16265 (BKP64_16265) - 3520207..3521073 (+) 867 WP_070972505.1 energy transducer TonB -
  BKP64_RS16270 (BKP64_16270) - 3521070..3521636 (+) 567 WP_070972507.1 YqgE/AlgH family protein -
  BKP64_RS16275 (BKP64_16275) ruvX 3521629..3522072 (+) 444 WP_070972509.1 Holliday junction resolvase RuvX -
  BKP64_RS16280 (BKP64_16280) pyrR 3522105..3522614 (+) 510 WP_070972511.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  BKP64_RS16285 (BKP64_16285) - 3522665..3523678 (+) 1014 WP_070972513.1 aspartate carbamoyltransferase catalytic subunit -

Sequence


Protein


Download         Length: 130 a.a.        Molecular weight: 14595.86 Da        Isoelectric Point: 5.2241

>NTDB_id=202214 BKP64_RS16255 WP_008175635.1 3518517..3518909(-) (pilG) [Marinobacter salinus strain Hb8]
MDDNFENLKIMVIDDSKTIRRTAETLLKKVGCEVITATDGFDALAKIADSQPDIIFVDIMMPRLDGYQTCALIKNNSSFK
KTPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKDELLNTIRQYVPQAEQ

Nucleotide


Download         Length: 393 bp        

>NTDB_id=202214 BKP64_RS16255 WP_008175635.1 3518517..3518909(-) (pilG) [Marinobacter salinus strain Hb8]
ATGGATGACAACTTCGAGAACTTGAAGATCATGGTGATCGACGACAGCAAAACGATCCGTCGCACCGCAGAAACCCTTCT
GAAAAAGGTCGGCTGTGAGGTCATCACCGCAACTGACGGCTTTGACGCTCTGGCAAAAATTGCCGATTCCCAACCGGACA
TCATTTTTGTAGATATCATGATGCCCCGCCTGGACGGCTACCAGACCTGCGCACTTATCAAGAACAATTCCTCTTTCAAA
AAGACGCCGGTTATCATGCTCTCCAGCAAAGACGGACTGTTTGACAAGGCCAAGGGACGTATCGTCGGCTCGGACCAGTA
TCTGACCAAACCGTTCAGCAAGGATGAGCTGCTCAACACTATCCGCCAGTATGTCCCCCAGGCGGAACAGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB G6YWX8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

78.4

96.154

0.754

  vicR Streptococcus mutans UA159

41.803

93.846

0.392

  micA Streptococcus pneumoniae Cp1015

44.037

83.846

0.369

  pilH Synechocystis sp. PCC 6803

40.517

89.231

0.362


Multiple sequence alignment