Detailed information NTG0201662

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: AB526_RS01660
• Genome accession: NZ_CP017682
• Coordinates: 358766..359269 (+)
• Length: 167 a.a.
• NCBI ID: WP_000934799.1
• Uniprot ID: A0A7U7IE99
• Organism: Staphylococcus aureus strain CFSAN007850
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 353766..364269

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB526_RS01625 (AB526_01590)	-	354706..355551 (+)	846	WP_001557587.1	ParB/RepB/Spo0J family partition protein	-
AB526_RS01630 (AB526_01595)	-	355705..356586 (+)	882	WP_000373073.1	mechanosensitive ion channel family protein	-
AB526_RS01635 (AB526_01600)	-	356616..356819 (+)	204	WP_000157348.1	DUF951 domain-containing protein	-
AB526_RS01640 (AB526_01605)	ychF	356831..357928 (+)	1098	WP_001218732.1	redox-regulated ATPase YchF	-
AB526_RS01645 (AB526_01610)	-	358014..358205 (-)	192	WP_001052484.1	hypothetical protein	-
AB526_RS01655 (AB526_01615)	rpsF	358449..358745 (+)	297	WP_001261460.1	30S ribosomal protein S6	-
AB526_RS01660 (AB526_01620)	ssbA	358766..359269 (+)	504	WP_000934799.1	single-stranded DNA-binding protein	Machinery gene
AB526_RS01665 (AB526_01625)	rpsR	359321..359563 (+)	243	WP_000897044.1	30S ribosomal protein S18	-
AB526_RS01670 (AB526_01630)	-	359802..360702 (-)	901	Protein_319	Abi family protein	-
AB526_RS01675 (AB526_01635)	-	360704..361918 (-)	1215	WP_031765313.1	site-specific integrase	-
AB526_RS01680 (AB526_01640)	-	362182..362907 (-)	726	WP_000668215.1	helix-turn-helix transcriptional regulator	-
AB526_RS01685 (AB526_01645)	-	363080..363292 (+)	213	WP_001245562.1	helix-turn-helix transcriptional regulator	-
AB526_RS01690 (AB526_01650)	-	363293..363565 (+)	273	WP_001138300.1	helix-turn-helix domain-containing protein	-
AB526_RS01695 (AB526_01655)	-	363577..363723 (+)	147	WP_000784875.1	hypothetical protein	-
AB526_RS01700 (AB526_01660)	-	363716..363925 (+)	210	WP_001058486.1	hypothetical protein	-
AB526_RS01705 (AB526_01665)	-	363928..364251 (+)	324	WP_001103945.1	DUF1474 family protein	-

Sequence

Protein

• Length: 167 a.a.
• Molecular weight: 18539.12 Da
• Isoelectric Point: 4.7305

>NTDB_id=201662 AB526_RS01660 WP_000934799.1 358766..359269(+) (ssbA) [Staphylococcus aureus strain CFSAN007850]
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF

Nucleotide

• Length: 504 bp

>NTDB_id=201662 AB526_RS01660 WP_000934799.1 358766..359269(+) (ssbA) [Staphylococcus aureus strain CFSAN007850]
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGCGTTCAATTCCTTGAACCTAAAAA
TGCGCAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (2-103)

3D structure

• AlphaFold DB: A0A7U7IE99

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Bacillus subtilis subsp. subtilis str. 168	65.341	100	0.689
ssb	Latilactobacillus sakei subsp. sakei 23K	54.971	100	0.563
ssbB	Bacillus subtilis subsp. subtilis str. 168	58.491	63.473	0.371
ssb	Glaesserella parasuis strain SC1401	34.463	100	0.365