Detailed information NTG0020164

Bioinformatically predicted

Overview

• Name: uvrB
• Type: Machinery gene
• Locus tag: SSU05_1024
• Genome accession: CP000407
• Coordinates: 1001573..1002784 (-)
• Length: 403 a.a.
• NCBI ID: ABP89990.1
• Uniprot ID: -
• Organism: Streptococcus suis 05ZYH33
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 996573..1007784

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SSU05_1023	-	999735..1001570 (-)	1836	ABP89989.1	hypothetical protein	-
SSU05_1024	uvrB	1001573..1002784 (-)	1212	ABP89990.1	Helicase subunit of the DNA excision repair complex	Machinery gene
SSU05_1025	uvrB	1002741..1003556 (-)	816	ABP89991.1	Helicase subunit of the DNA excision repair complex	Machinery gene
SSU05_1026	-	1003748..1004239 (+)	492	ABP89992.1	ABC-type amino acid transport/signal transduction system, periplasmic component/domain	-
SSU05_1027	-	1004250..1005563 (+)	1314	ABP89993.1	ABC-type amino acid transport/signal transduction system, periplasmic component/domain	-
SSU05_1028	-	1005412..1005951 (+)	540	ABP89994.1	ABC-type amino acid transport/signal transduction system, periplasmic component/domain	-
SSU05_1029	-	1005951..1006691 (+)	741	ABP89995.1	ABC-type polar amino acid transport system, ATPase component	-
SSU05_1030	-	1006945..1007436 (-)	492	ABP89996.1	Histone acetyltransferase HPA2 and related acetyltransferases	-

Sequence

Protein

• Length: 403 a.a.
• Molecular weight: 46469.12 Da
• Isoelectric Point: 4.8794

>NTDB_id=20164 SSU05_1024 ABP89990.1 1001573..1002784(-) (uvrB) [Streptococcus suis 05ZYH33]
MTTWKRSLPRSGGTRSTTQVFEAEGKLLEAQRLKQRTDYDIEMLREMGYTNGVENYSRHMDGRSEGEPPYTLLDFFPEDY
LIMIDESHMTMGQIKGMYNGDRSRKEMLVNYGFRLPSALDNRPLRREEFESHVHQIVYVSATPGDYEMEQTETVVEQIIR
PTGLLDPEVEVRPTMGQMDDLLGEINARVEKGERTFITTLTKKMAEDLTDYLKEMGVKVKYMHSDIKTLERTEIIRDLRL
GVFDVLIGINLLREGIDVPEVSLVAILDADKEGFLRNERGLIQTIGRAARNSEGHVIMYADKVTESMRKAMEETARRRQI
QMAYNEEHGIIPQTIKKEIRDLISVTKAVTQDKEEVVDFNALNKDERKAMIKKLEGQMQEAAEVLDFELAAQIRDMVIEL
KNM

Nucleotide

• Length: 1212 bp

>NTDB_id=20164 SSU05_1024 ABP89990.1 1001573..1002784(-) (uvrB) [Streptococcus suis 05ZYH33]
ATGACCACATGGAAACGGTCATTGCCAAGATCAGGCGGAACTAGAAGCACAACTCAAGTCTTTGAGGCAGAAGGAAAACT
CTTAGAAGCTCAGCGATTGAAACAACGAACCGACTACGATATCGAGATGCTTCGGGAGATGGGCTATACCAACGGAGTTG
AGAACTATTCACGACACATGGACGGGCGAAGTGAGGGGGAGCCTCCTTATACCCTGCTGGACTTTTTCCCTGAGGACTAT
CTGATTATGATTGACGAGAGCCACATGACCATGGGGCAGATTAAGGGGATGTACAATGGTGACCGCTCACGCAAGGAGAT
GCTGGTTAACTATGGTTTCCGTCTACCGAGTGCATTGGATAATCGTCCGCTGCGCAGGGAAGAATTTGAGAGTCATGTCC
ACCAGATTGTCTATGTATCTGCGACGCCGGGTGACTATGAAATGGAGCAGACAGAGACCGTTGTCGAGCAGATTATCCGG
CCGACCGGGCTTTTGGATCCAGAAGTGGAAGTCCGTCCAACTATGGGCCAAATGGACGACCTCCTAGGTGAAATCAATGC
CCGTGTTGAAAAAGGCGAGCGAACCTTTATCACTACCCTGACCAAGAAAATGGCAGAGGACTTGACCGACTACCTGAAAG
AAATGGGCGTCAAGGTCAAGTATATGCACTCGGACATCAAGACCTTGGAGCGTACGGAGATTATCCGTGATCTTCGCTTG
GGTGTCTTTGATGTTTTGATAGGGATTAACCTGCTTCGTGAAGGGATTGACGTGCCAGAAGTTAGTCTAGTCGCTATCTT
AGACGCAGACAAGGAGGGCTTCCTCCGTAATGAACGGGGGCTCATCCAGACAATCGGTCGAGCGGCTCGTAACTCTGAAG
GTCATGTGATTATGTATGCGGACAAGGTCACCGAGTCCATGCGGAAGGCCATGGAAGAAACAGCCCGCCGCCGTCAAATC
CAGATGGCTTATAATGAAGAGCATGGCATTATTCCACAGACCATTAAGAAAGAGATCCGTGACCTGATTAGCGTGACCAA
GGCTGTCACTCAGGACAAGGAAGAGGTTGTGGACTTCAATGCTCTTAATAAAGATGAACGCAAGGCCATGATCAAGAAAC
TGGAAGGTCAGATGCAGGAAGCCGCAGAAGTGCTTGACTTTGAACTGGCAGCCCAGATTCGCGATATGGTCATTGAGTTG
AAGAATATGTAG

Domains

Predicted by InterProScan.

• UvrB/uvrC motif (UVR) (368-402)

• Helicase conserved C-terminal domain (Helicase_C) (187-291)

• Ultra-violet resistance protein B (UvrB) (298-340)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrB	Streptococcus pneumoniae R6	89.583	95.285	0.854
uvrB	Streptococcus pneumoniae D39	89.583	95.285	0.854
uvrB	Streptococcus pneumoniae TIGR4	89.323	95.285	0.851