Detailed information NTG0020089

Bioinformatically predicted

Overview

• Name: ciaH
• Type: Regulator
• Locus tag: SSU05_1094
• Genome accession: CP000407
• Coordinates: 1058289..1059668 (-)
• Length: 459 a.a.
• NCBI ID: ABP90060.1
• Uniprot ID: -
• Organism: Streptococcus suis 05ZYH33
• Function: repress competence development; post-transcriptional repression of CSP production (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IScluster/Tn	1055851..1062495	1058289..1059668	within	0

Gene organization within MGE regions

Location: 1055851..1062495

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SSU05_1090	-	1055851..1056351 (-)	501	ABP90056.1	transposase of IS200 family	-
SSU05_1091	-	1056729..1057958 (-)	1230	ABP90057.1	Uncharacterized protein involved in cytokinesis, contains TGc (transglutaminase/protease-like) domain	-
SSU05_1092	-	1058097..1058288 (+)	192	ABP90058.1	hypothetical protein	-
SSU05_1093	-	1058210..1058317 (+)	108	ABP90059.1	hypothetical protein	-
SSU05_1094	ciaH	1058289..1059668 (-)	1380	ABP90060.1	Signal transduction histidine kinase	Regulator
SSU05_1095	ciaR	1059661..1060335 (-)	675	ABP90061.1	Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain	Regulator
SSU05_1096	-	1060325..1060432 (-)	108	ABP90062.1	hypothetical protein	-
SSU05_1097	-	1060526..1060906 (-)	381	ABP90063.1	hypothetical protein	-
SSU05_1098	-	1061144..1061809 (+)	666	ABP90064.1	Transposase and inactivated derivative	-
SSU05_1099	-	1061836..1062495 (+)	660	ABP90065.1	Transposase and inactivated derivative	-

Sequence

Protein

• Length: 459 a.a.
• Molecular weight: 51955.61 Da
• Isoelectric Point: 5.5984

>NTDB_id=20089 SSU05_1094 ABP90060.1 1058289..1059668(-) (ciaH) [Streptococcus suis 05ZYH33]
MPKRIGKLVYTDKFSFFIRYFAVFTLIFGLMTAIIFQLMRSTMYQNSDNTLKRIKEEPAMAVGFAIARTYEPNSVFILQD
SPTSEETTSSSSDSMPVPKEQKNTRDGDQLRLGVNTHVLLYSKSGEMVNPDTFTGLANLPLDKEKLGEIKETTVESSFGM
SEDYRYITIGLATDELGYYSSYDIKYATILVNVSQIKSSIESYESTVAIVMVSAWLISILASIYLSNLSMRPILISYQKQ
KDFVENASHELRTPLAVLQNRLESLFRHPETTILESSESIGSSLEEVRNMRLLTTNLLNLARRDDGLKVDMIDVQPNYFD
EIFANYLMIAEENGKTLTVNNLIHQPIRTDKVLIKQLLTILFDNAMKYTDDDGTIQIAANIKDKLVCFTVIDNGLGISDV
DKKKIFDRFYRVDKARTRQKGGFGLGLSLAQQIIKNLDGEISVRDNQPKGTIFEVRLPK

Nucleotide

• Length: 1380 bp

>NTDB_id=20089 SSU05_1094 ABP90060.1 1058289..1059668(-) (ciaH) [Streptococcus suis 05ZYH33]
ATGCCTAAGCGAATCGGAAAATTAGTGTATACGGATAAATTTTCCTTCTTTATCCGTTATTTTGCAGTATTTACCCTGAT
TTTTGGCTTGATGACAGCTATCATTTTTCAATTAATGCGTTCAACTATGTATCAAAATTCAGATAATACCTTGAAACGGA
TTAAGGAAGAACCAGCGATGGCTGTTGGTTTTGCGATCGCAAGAACCTATGAGCCCAACTCTGTCTTTATACTTCAAGAT
AGCCCAACTAGTGAAGAAACGACGAGCTCTAGCTCAGATAGCATGCCTGTTCCTAAAGAACAAAAAAATACTAGAGATGG
AGATCAGCTGAGATTAGGTGTCAATACTCATGTCTTACTCTATAGTAAAAGTGGAGAAATGGTCAATCCGGATACTTTTA
CTGGTTTGGCCAACCTACCGTTAGATAAGGAAAAATTGGGTGAAATTAAGGAAACTACGGTTGAATCAAGTTTTGGTATG
TCTGAAGATTATCGCTATATAACGATTGGGCTGGCTACAGATGAACTAGGTTATTATTCGTCCTATGATATAAAATATGC
GACAATTTTGGTGAATGTCAGCCAAATTAAATCTTCCATTGAGAGCTATGAATCGACAGTTGCTATTGTTATGGTATCAG
CTTGGTTGATTTCTATACTAGCAAGTATTTACCTATCGAATCTTAGCATGCGTCCAATCCTAATTAGTTATCAAAAACAA
AAAGACTTCGTTGAAAATGCTAGTCATGAGTTACGCACACCGTTGGCAGTTCTTCAAAATCGCCTGGAAAGTCTATTTCG
TCATCCCGAGACAACTATTTTGGAAAGTAGTGAAAGCATCGGATCTAGTTTAGAAGAAGTTCGAAATATGCGACTATTAA
CAACGAACTTGCTCAATTTGGCTCGTCGTGATGATGGCTTAAAAGTCGATATGATCGATGTCCAACCCAACTATTTTGAT
GAAATCTTTGCTAATTACCTTATGATTGCCGAAGAAAATGGAAAAACTCTAACAGTTAATAATTTGATTCATCAGCCAAT
TCGAACAGACAAGGTTTTGATTAAACAGTTGCTCACCATTTTGTTTGACAACGCTATGAAGTATACCGATGATGATGGGA
CAATTCAAATAGCAGCTAATATCAAGGACAAACTAGTTTGTTTTACAGTTATTGACAATGGTTTGGGAATCAGCGATGTC
GATAAAAAGAAAATCTTTGATCGCTTTTACCGAGTTGACAAGGCTAGAACACGTCAAAAAGGTGGATTTGGTTTAGGTTT
ATCTTTAGCTCAACAAATTATTAAGAATCTAGATGGTGAGATTTCTGTGAGAGATAACCAACCGAAAGGAACTATTTTTG
AGGTACGTTTACCCAAATAA

Domains

Predicted by InterproScan.

• His Kinase A (phospho-acceptor) domain (HisKA) (240-306)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (350-458)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ciaH	Streptococcus pneumoniae Rx1	49.237	100	0.492
ciaH	Streptococcus pneumoniae D39	49.237	100	0.492
ciaH	Streptococcus pneumoniae R6	49.237	100	0.492
ciaH	Streptococcus pneumoniae TIGR4	49.237	100	0.492
ciaH	Streptococcus mutans UA159	49.664	97.386	0.484