Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | BJD94_RS07715 | Genome accession | NZ_CP017635 |
| Coordinates | 1477907..1478209 (-) | Length | 100 a.a. |
| NCBI ID | WP_038968878.1 | Uniprot ID | - |
| Organism | Vibrio vulnificus Env1 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1472907..1483209
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BJD94_RS07690 (BJD94_06565) | - | 1473449..1474663 (+) | 1215 | WP_017420942.1 | pyridoxal phosphate-dependent aminotransferase | - |
| BJD94_RS07695 (BJD94_06570) | yfbR | 1474745..1475329 (+) | 585 | WP_017420943.1 | 5'-deoxynucleotidase | - |
| BJD94_RS07700 (BJD94_06575) | - | 1475335..1476666 (+) | 1332 | WP_039561952.1 | anti-phage deoxyguanosine triphosphatase | - |
| BJD94_RS07705 (BJD94_06580) | - | 1476688..1477296 (-) | 609 | WP_038939460.1 | tRNA-uridine aminocarboxypropyltransferase | - |
| BJD94_RS07710 (BJD94_06585) | rrtA | 1477300..1477860 (+) | 561 | WP_277752986.1 | rhombosortase | - |
| BJD94_RS07715 (BJD94_06590) | comEA | 1477907..1478209 (-) | 303 | WP_038968878.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| BJD94_RS07720 (BJD94_06595) | ppiD | 1478342..1480201 (-) | 1860 | WP_072600099.1 | peptidylprolyl isomerase | - |
| BJD94_RS07725 (BJD94_06600) | - | 1480378..1480650 (-) | 273 | WP_013572181.1 | HU family DNA-binding protein | - |
| BJD94_RS07730 (BJD94_06605) | lon | 1480844..1483195 (-) | 2352 | WP_017420949.1 | endopeptidase La | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 10931.82 Da Isoelectric Point: 9.6577
>NTDB_id=200808 BJD94_RS07715 WP_038968878.1 1477907..1478209(-) (comEA) [Vibrio vulnificus Env1]
MKQVITLLAMLMAFSFPSVSFADSATKAAEKYEGIEISVNINTATAEEIAMMLKGVGIKKAQQIVDFREAHGPFKTVDEL
VQVKGIGKSTIEKNQSRIKL
MKQVITLLAMLMAFSFPSVSFADSATKAAEKYEGIEISVNINTATAEEIAMMLKGVGIKKAQQIVDFREAHGPFKTVDEL
VQVKGIGKSTIEKNQSRIKL
Nucleotide
Download Length: 303 bp
>NTDB_id=200808 BJD94_RS07715 WP_038968878.1 1477907..1478209(-) (comEA) [Vibrio vulnificus Env1]
ATGAAACAGGTAATTACCCTTTTAGCCATGCTAATGGCATTCTCTTTTCCTTCCGTTTCTTTTGCGGACTCTGCAACGAA
AGCAGCCGAGAAATATGAAGGCATTGAGATTTCCGTCAACATCAACACGGCAACAGCAGAAGAAATTGCCATGATGTTAA
AAGGCGTTGGTATTAAAAAAGCTCAGCAAATTGTTGACTTTAGAGAAGCTCATGGACCGTTTAAAACGGTTGATGAGTTA
GTTCAAGTGAAAGGTATCGGTAAGTCAACGATTGAGAAAAATCAGTCACGGATTAAGTTGTAA
ATGAAACAGGTAATTACCCTTTTAGCCATGCTAATGGCATTCTCTTTTCCTTCCGTTTCTTTTGCGGACTCTGCAACGAA
AGCAGCCGAGAAATATGAAGGCATTGAGATTTCCGTCAACATCAACACGGCAACAGCAGAAGAAATTGCCATGATGTTAA
AAGGCGTTGGTATTAAAAAAGCTCAGCAAATTGTTGACTTTAGAGAAGCTCATGGACCGTTTAAAACGGTTGATGAGTTA
GTTCAAGTGAAAGGTATCGGTAAGTCAACGATTGAGAAAAATCAGTCACGGATTAAGTTGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
59 |
100 |
0.59 |
| comEA | Vibrio campbellii strain DS40M4 |
54 |
100 |
0.54 |
| comEA | Vibrio cholerae C6706 |
51.02 |
98 |
0.5 |
| comEA | Vibrio cholerae strain A1552 |
51.02 |
98 |
0.5 |