Detailed information NTG0020022

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: SDD27957_01115
• Genome accession: CM001076
• Coordinates: 212030..213319 (-)
• Length: 429 a.a.
• NCBI ID: EFY01915.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 207030..218319

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SDD27957_01090	-	207044..208537 (+)	1494	EFY01910.1	bacteriocin ABC-type exporter, ATP binding/permease protein, putative	-
SDD27957_01095	-	208640..208978 (+)	339	EFY01911.1	putative cytoplasmic protein	-
SDD27957_01100	-	208981..209349 (+)	369	EFY01912.1	hypothetical protein	-
SDD27957_01105	-	209515..209661 (-)	147	EFY01913.1	hypothetical protein	-
SDD27957_01110	-	209801..211591 (+)	1791	EFY01914.1	phage integrase family site specific recombinase	-
SDD27957_01115	rarA	212030..213319 (-)	1290	EFY01915.1	recombination factor protein RarA	Machinery gene
SDD27957_01120	-	213352..213918 (-)	567	EFY01916.1	anthranilate synthase component II	-
SDD27957_01125	-	213951..215714 (-)	1764	EFY01917.1	Para-aminobenzoate synthetase component I / 4-amino-4-deoxychorismate lyase	-
SDD27957_01130	-	215855..217867 (-)	2013	EFY01918.1	Amidase family protein	-

Sequence

Protein

• Length: 429 a.a.
• Molecular weight: 47223.88 Da
• Isoelectric Point: 6.6991

>NTDB_id=20022 SDD27957_01115 EFY01915.1 212030..213319(-) (rarA) [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957]
MPDHLALRMRPKTISEVIGQEHLVGEGKIIHRMVEANMLSSMILYGPPGIGKTSIASAIAGTTKYAFRTFNATVDSKKRL
QEIAEEAKFSGGLVLLLDEIHRLDKTKQDFLLPLLENGTIIMIGATTENPFFSVTPAIRSRVQIFELEPLSNEDIKRALQ
TAITDKERGFAFDVMLDDNALDFIATATNGDLRSAYHSLDLAVMSTKPDSDGKRHITLDTVENSLQRSYITMDKDGDGHY
DVLSALQKAIRGSDVNASLHYAARLVEAGDLPSLARRLIVIAYEDIGLANPDAQVHTVTALDAAQKIGFPEARILIANVV
IDLALSPKSNSAYLAMDAALSDLRTSGNLPIPRHLRDGHYAGSKELGNAKDYLYPHAYPEKWVKQQYLPDKLIGKQYFSP
NETGKYERALGANKERIDKLSSHSTGIPK

Nucleotide

• Length: 1290 bp

>NTDB_id=20022 SDD27957_01115 EFY01915.1 212030..213319(-) (rarA) [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957]
ATGCCCGATCATTTAGCGCTCCGCATGCGCCCCAAAACCATTTCAGAGGTCATCGGACAAGAACATCTTGTTGGCGAAGG
CAAAATCATCCATCGCATGGTGGAAGCCAATATGCTATCGTCCATGATTCTCTATGGTCCTCCAGGAATCGGTAAAACTT
CCATTGCTAGCGCTATTGCAGGTACCACCAAGTATGCCTTTCGAACCTTTAATGCCACCGTCGATAGCAAAAAACGTCTC
CAAGAAATTGCTGAGGAGGCCAAATTTTCAGGAGGATTGGTATTGCTACTAGACGAGATTCATCGACTGGACAAAACCAA
ACAAGACTTCCTGCTCCCCTTACTGGAAAATGGCACCATTATCATGATTGGCGCAACCACTGAGAATCCCTTCTTTTCAG
TGACACCCGCTATCAGAAGCCGGGTCCAGATTTTTGAACTGGAACCTCTCTCCAACGAGGATATCAAGCGTGCCCTTCAA
ACTGCCATTACCGATAAAGAAAGAGGCTTTGCCTTTGACGTGATGCTTGACGATAATGCTCTTGATTTTATCGCAACGGC
TACCAATGGTGACTTACGCTCAGCCTATCACTCTCTGGATCTAGCAGTCATGTCCACAAAGCCAGATAGCGACGGGAAGC
GACACATCACCTTAGACACTGTTGAAAATTCCTTGCAGCGCAGCTATATTACTATGGATAAGGATGGCGACGGGCATTAC
GATGTGCTATCTGCTCTCCAAAAAGCTATTCGCGGCTCCGATGTCAATGCCAGTCTTCACTATGCGGCACGATTAGTGGA
AGCGGGCGATTTACCAAGCCTAGCCAGACGATTGATTGTGATTGCTTATGAAGATATTGGTTTGGCTAATCCTGACGCCC
AAGTCCATACCGTTACCGCACTTGATGCCGCTCAGAAAATCGGTTTCCCAGAAGCACGTATTCTAATTGCTAACGTGGTC
ATTGATTTGGCCTTATCCCCAAAATCTAACTCAGCTTATCTGGCCATGGATGCTGCCTTAAGCGATTTGAGAACATCAGG
AAACCTTCCTATTCCAAGGCATTTGAGAGATGGGCATTATGCCGGCAGTAAAGAACTGGGTAATGCCAAAGATTATCTTT
ACCCCCACGCTTACCCTGAAAAATGGGTGAAACAACAGTACCTGCCAGATAAATTAATCGGTAAACAGTATTTTTCCCCC
AACGAAACAGGAAAATATGAACGTGCCCTGGGGGCCAATAAAGAGCGTATTGACAAGCTTTCTAGTCACTCAACCGGAAT
CCCAAAATAG

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (173-251)

• ATPase family associated with various cellular activities (AAA) (AAA) (42-144)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-415)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	60.671	97.203	0.59