Detailed information NTG0020022

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: SDD27957_01725
• Genome accession: CM001076
• Coordinates: 348867..349793 (+)
• Length: 308 a.a.
• NCBI ID: EFY02029.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 343867..354793

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SDD27957_01715	amiA	345329..347299 (+)	1971	EFY02027.1	oligopeptide-binding protein oppA	Regulator
SDD27957_01720	amiC	347365..348867 (+)	1503	EFY02028.1	Oligopeptide transport system permease protein oppB	Regulator
SDD27957_01725	amiD	348867..349793 (+)	927	EFY02029.1	Oligopeptide transport system permease protein oppC	Regulator
SDD27957_01730	amiE	349802..350872 (+)	1071	EFY02030.1	putative oligopeptide transporter ATP-binding protein	Regulator
SDD27957_01735	amiF	350865..351788 (+)	924	EFY02031.1	Oligopeptide transport ATP-binding protein oppF	Regulator

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 34888.93 Da
• Isoelectric Point: 9.2024

>NTDB_id=20022 SDD27957_01725 EFY02029.1 348867..349793(+) (amiD) [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957]
METIDKSKFRFVERDSRASEVIDTPAYSYWKSVFRQFFSKKSTIFMLMILVTILLMSFIYPMFANYDFGDVSNINDFSKR
YIWPNAEYWFGTDKNGQSLFDGVWYGARNSILISVIATLINVTIGVILGAIWGVSKAFDKVMIEIYNVISNIPSMLIIIV
LTYSLGAGFWNLILAFCITGWIGVAYSIRVQILRYRDLEYNLASQTLGTPMYKIAIKNLLPQLVSVIMTMLSQMLPVYVS
SEAFLSFFGIGLPTTTPSLGRLIANYSSNLTTNAYLFWIPLVTLILVSLPLYIVGQNLADASDPRSHR

Nucleotide

• Length: 927 bp

>NTDB_id=20022 SDD27957_01725 EFY02029.1 348867..349793(+) (amiD) [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957]
ATGGAAACGATTGATAAATCAAAATTTCGATTTGTTGAGCGCGATAGCAGAGCCTCCGAAGTGATTGATACCCCTGCTTA
TTCTTATTGGAAATCCGTATTCCGTCAATTTTTCTCTAAAAAGTCTACTATCTTCATGCTAATGATTTTAGTAACAATCT
TATTGATGAGTTTCATTTACCCAATGTTTGCGAATTATGACTTTGGTGATGTGAGTAATATCAACGATTTCTCGAAACGT
TATATTTGGCCCAACGCCGAATACTGGTTTGGAACAGATAAAAATGGACAATCTTTGTTTGATGGTGTCTGGTATGGAGC
GCGTAATTCTATCTTAATTTCTGTTATAGCAACATTGATTAATGTGACTATCGGAGTTATTTTAGGAGCTATTTGGGGAG
TTTCTAAAGCATTTGATAAAGTTATGATTGAGATTTATAATGTCATCTCAAACATTCCTTCAATGTTAATCATCATTGTT
TTGACCTATTCATTAGGGGCTGGTTTTTGGAATTTAATTTTAGCTTTCTGTATTACTGGATGGATCGGTGTAGCTTATTC
TATCCGTGTGCAAATCTTACGTTACCGTGATTTGGAGTACAACCTTGCTAGCCAAACCCTAGGAACACCAATGTACAAAA
TTGCCATTAAAAACCTCTTACCTCAATTGGTTTCAGTTATCATGACCATGTTGTCACAAATGTTACCAGTGTACGTGTCT
TCTGAGGCTTTCTTATCCTTCTTTGGGATTGGTTTACCAACCACAACTCCAAGCTTAGGGCGTTTGATTGCTAATTATTC
AAGCAACTTAACAACAAATGCTTACCTCTTCTGGATTCCCTTAGTCACGTTGATTTTAGTATCATTACCATTGTATATTG
TCGGACAAAACCTGGCAGATGCTAGCGACCCACGTTCACATAGATAG

Domains

Predicted by InterproScan.

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-72)

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (125-305)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus salivarius strain HSISS4	73.052	100	0.731
amiD	Streptococcus thermophilus LMG 18311	73.052	100	0.731
amiD	Streptococcus thermophilus LMD-9	73.052	100	0.731