Detailed information NTG0020024

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: SDD27957_01735
• Genome accession: CM001076
• Coordinates: 350865..351788 (+)
• Length: 307 a.a.
• NCBI ID: EFY02031.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 345865..356788

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SDD27957_01720	amiC	347365..348867 (+)	1503	EFY02028.1	Oligopeptide transport system permease protein oppB	Regulator
SDD27957_01725	amiD	348867..349793 (+)	927	EFY02029.1	Oligopeptide transport system permease protein oppC	Regulator
SDD27957_01730	amiE	349802..350872 (+)	1071	EFY02030.1	putative oligopeptide transporter ATP-binding protein	Regulator
SDD27957_01735	amiF	350865..351788 (+)	924	EFY02031.1	Oligopeptide transport ATP-binding protein oppF	Regulator

Sequence

Protein

• Length: 307 a.a.
• Molecular weight: 34768.92 Da
• Isoelectric Point: 6.4058

>NTDB_id=20024 SDD27957_01735 EFY02031.1 350865..351788(+) (amiF) [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957]
MSEKLVEVKDLEISFGEGKKKFVAVKNANFFIKKGETFSLVGESGSGKTTIGRAIIGLNDTSSGDILYDGKVINRKKSKS
ESNELIRKIQMIFQDPAASLNERATVDYIISEGLYNFNLFKTEEERKEKIKNMMAEVGLLSEHLTRYPHEFSGGQRQRIG
IARALVMNPEFVIADEPISALDVSVRAQVLNLLKRMQAEKGLTYLFIAHDLSVVRFISDRIAVIHKGVIVEVAETEELFN
NPIHPYTKSLLSAVPIPDPILERQKELIVYNPEQHDYTEDKPTMVEIKPNHFVWANQAEVEKYKAEQ

Nucleotide

• Length: 924 bp

>NTDB_id=20024 SDD27957_01735 EFY02031.1 350865..351788(+) (amiF) [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957]
ATGTCTGAGAAATTAGTCGAAGTTAAAGACCTAGAAATTTCCTTCGGAGAGGGAAAGAAAAAATTTGTTGCGGTTAAAAA
TGCCAATTTCTTTATCAAAAAAGGTGAAACCTTCTCTTTAGTTGGAGAATCTGGAAGTGGTAAAACAACAATTGGTCGTG
CTATTATTGGTTTGAATGATACCAGTTCTGGTGACATCCTTTATGATGGAAAAGTTATCAATCGAAAAAAGTCAAAATCA
GAATCAAATGAGCTCATTCGTAAGATTCAGATGATTTTCCAAGATCCTGCAGCTAGTTTGAATGAGCGTGCAACTGTTGA
CTATATCATTTCAGAAGGTCTTTATAATTTTAATCTGTTCAAAACAGAAGAAGAACGTAAAGAAAAAATTAAGAACATGA
TGGCCGAAGTTGGTTTGTTATCAGAACATTTGACCCGCTATCCTCACGAATTTTCAGGAGGCCAACGTCAGCGGATTGGT
ATCGCGAGAGCCCTGGTGATGAATCCCGAATTTGTCATTGCTGATGAGCCTATATCCGCTCTAGATGTTTCTGTTCGAGC
ACAGGTCTTGAATCTTCTTAAAAGAATGCAAGCAGAAAAAGGACTCACTTACCTTTTCATTGCCCACGACCTATCAGTTG
TTCGCTTCATTTCAGATCGTATTGCGGTTATCCATAAAGGAGTTATTGTGGAGGTTGCCGAAACAGAAGAATTATTTAAT
AATCCCATCCACCCTTACACAAAATCTCTTTTATCAGCTGTTCCTATTCCAGATCCAATATTGGAACGTCAAAAAGAGCT
TATTGTCTATAATCCAGAGCAACATGACTATACAGAAGATAAACCAACGATGGTTGAAATTAAGCCAAATCACTTTGTGT
GGGCTAACCAAGCAGAAGTTGAAAAGTATAAAGCAGAACAATAG

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (230-262)

• ABC transporter (ABC_tran) (25-178)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMG 18311	81.759	100	0.818
amiF	Streptococcus thermophilus LMD-9	81.433	100	0.814
amiF	Streptococcus salivarius strain HSISS4	81.433	100	0.814