Detailed information
Bioinformatically predicted
Overview
| Name | comEA/comE1 | Type | Machinery gene |
| Locus tag | BG560_RS11180 | Genome accession | NZ_CP017516 |
| Coordinates | 2217933..2218271 (+) | Length | 112 a.a. |
| NCBI ID | WP_006251644.1 | Uniprot ID | A0A248ZWT2 |
| Organism | Mannheimia haemolytica strain 23217 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2212933..2223271
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BG560_RS11155 (BG560_10870) | rpsL | 2213175..2213549 (-) | 375 | WP_005543325.1 | 30S ribosomal protein S12 | - |
| BG560_RS11160 (BG560_10875) | rfaC | 2213670..2214629 (-) | 960 | WP_006250332.1 | lipopolysaccharide heptosyltransferase RfaC | - |
| BG560_RS11165 (BG560_10880) | waaF | 2214697..2215734 (-) | 1038 | WP_061888646.1 | lipopolysaccharide heptosyltransferase II | - |
| BG560_RS11170 (BG560_10885) | - | 2215845..2216261 (-) | 417 | WP_020824267.1 | MliC family protein | - |
| BG560_RS11175 (BG560_10890) | - | 2216321..2217640 (-) | 1320 | WP_006251645.1 | LysM-like peptidoglycan-binding domain-containing protein | - |
| BG560_RS11180 (BG560_10895) | comEA/comE1 | 2217933..2218271 (+) | 339 | WP_006251644.1 | ComEA family DNA-binding protein | Machinery gene |
| BG560_RS11185 (BG560_10900) | asd | 2218436..2219329 (+) | 894 | WP_006251643.1 | archaetidylserine decarboxylase | - |
| BG560_RS11190 (BG560_10905) | hsdR | 2219401..2221752 (+) | 2352 | WP_006250003.1 | EcoAI/FtnUII family type I restriction enzme subunit R | - |
| BG560_RS11195 (BG560_10910) | - | 2221800..2223269 (+) | 1470 | WP_006251642.1 | HsdM family class I SAM-dependent methyltransferase | - |
Sequence
Protein
Download Length: 112 a.a. Molecular weight: 12111.91 Da Isoelectric Point: 10.0993
>NTDB_id=199495 BG560_RS11180 WP_006251644.1 2217933..2218271(+) (comEA/comE1) [Mannheimia haemolytica strain 23217]
MKKIKQLGLTFLFGLNAMAFAQTPPTTMPVEQNAVTQPVQQTQITNANAVNINTASAAELQDKLVGIGQKKAQAIVDYRT
KNGNFKNIEQLAEVSGIGQATVEKNRANIILE
MKKIKQLGLTFLFGLNAMAFAQTPPTTMPVEQNAVTQPVQQTQITNANAVNINTASAAELQDKLVGIGQKKAQAIVDYRT
KNGNFKNIEQLAEVSGIGQATVEKNRANIILE
Nucleotide
Download Length: 339 bp
>NTDB_id=199495 BG560_RS11180 WP_006251644.1 2217933..2218271(+) (comEA/comE1) [Mannheimia haemolytica strain 23217]
ATGAAGAAAATCAAACAACTTGGTCTAACATTCTTGTTTGGCTTAAATGCAATGGCTTTTGCCCAAACACCGCCAACTAC
AATGCCTGTTGAACAAAATGCAGTCACTCAACCCGTACAGCAAACACAAATCACCAACGCCAATGCGGTAAATATCAATA
CTGCTAGTGCTGCTGAATTGCAAGACAAGCTAGTGGGAATTGGGCAGAAAAAAGCTCAAGCGATTGTCGATTACCGTACT
AAAAACGGCAATTTTAAAAACATTGAGCAACTTGCTGAAGTCTCCGGAATTGGGCAAGCAACGGTAGAAAAAAATCGAGC
CAATATTATTTTAGAATAA
ATGAAGAAAATCAAACAACTTGGTCTAACATTCTTGTTTGGCTTAAATGCAATGGCTTTTGCCCAAACACCGCCAACTAC
AATGCCTGTTGAACAAAATGCAGTCACTCAACCCGTACAGCAAACACAAATCACCAACGCCAATGCGGTAAATATCAATA
CTGCTAGTGCTGCTGAATTGCAAGACAAGCTAGTGGGAATTGGGCAGAAAAAAGCTCAAGCGATTGTCGATTACCGTACT
AAAAACGGCAATTTTAAAAACATTGAGCAACTTGCTGAAGTCTCCGGAATTGGGCAAGCAACGGTAGAAAAAAATCGAGC
CAATATTATTTTAGAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
59.292 |
100 |
0.598 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
52.747 |
81.25 |
0.429 |
| comEA | Vibrio cholerae C6706 |
54.651 |
76.786 |
0.42 |
| comEA | Vibrio cholerae strain A1552 |
54.651 |
76.786 |
0.42 |