Detailed information
Bioinformatically predicted
Overview
| Name | comEA/comE1 | Type | Machinery gene |
| Locus tag | BG573_RS11210 | Genome accession | NZ_CP017514 |
| Coordinates | 2234364..2234702 (+) | Length | 112 a.a. |
| NCBI ID | WP_006251644.1 | Uniprot ID | A0A248ZWT2 |
| Organism | Mannheimia haemolytica strain 23311 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2229364..2239702
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BG573_RS11185 (BG573_10905) | rpsL | 2229606..2229980 (-) | 375 | WP_005543325.1 | 30S ribosomal protein S12 | - |
| BG573_RS11190 (BG573_10910) | rfaC | 2230101..2231060 (-) | 960 | WP_006250332.1 | lipopolysaccharide heptosyltransferase RfaC | - |
| BG573_RS11195 (BG573_10915) | waaF | 2231128..2232165 (-) | 1038 | WP_020824266.1 | lipopolysaccharide heptosyltransferase II | - |
| BG573_RS11200 (BG573_10920) | - | 2232276..2232692 (-) | 417 | WP_020824267.1 | MliC family protein | - |
| BG573_RS11205 (BG573_10925) | - | 2232752..2234071 (-) | 1320 | WP_006251645.1 | LysM-like peptidoglycan-binding domain-containing protein | - |
| BG573_RS11210 (BG573_10930) | comEA/comE1 | 2234364..2234702 (+) | 339 | WP_006251644.1 | ComEA family DNA-binding protein | Machinery gene |
| BG573_RS11215 (BG573_10935) | asd | 2234867..2235760 (+) | 894 | WP_006251643.1 | archaetidylserine decarboxylase | - |
| BG573_RS11220 (BG573_10940) | hsdR | 2235832..2238183 (+) | 2352 | WP_006250003.1 | EcoAI/FtnUII family type I restriction enzme subunit R | - |
| BG573_RS11225 (BG573_10945) | - | 2238231..2239700 (+) | 1470 | WP_006251642.1 | HsdM family class I SAM-dependent methyltransferase | - |
Sequence
Protein
Download Length: 112 a.a. Molecular weight: 12111.91 Da Isoelectric Point: 10.0993
>NTDB_id=199447 BG573_RS11210 WP_006251644.1 2234364..2234702(+) (comEA/comE1) [Mannheimia haemolytica strain 23311]
MKKIKQLGLTFLFGLNAMAFAQTPPTTMPVEQNAVTQPVQQTQITNANAVNINTASAAELQDKLVGIGQKKAQAIVDYRT
KNGNFKNIEQLAEVSGIGQATVEKNRANIILE
MKKIKQLGLTFLFGLNAMAFAQTPPTTMPVEQNAVTQPVQQTQITNANAVNINTASAAELQDKLVGIGQKKAQAIVDYRT
KNGNFKNIEQLAEVSGIGQATVEKNRANIILE
Nucleotide
Download Length: 339 bp
>NTDB_id=199447 BG573_RS11210 WP_006251644.1 2234364..2234702(+) (comEA/comE1) [Mannheimia haemolytica strain 23311]
ATGAAGAAAATCAAACAACTTGGTCTAACATTCTTGTTTGGCTTAAATGCAATGGCTTTTGCCCAAACACCGCCAACTAC
AATGCCTGTTGAACAAAATGCAGTCACTCAACCCGTACAGCAAACACAAATCACCAACGCCAATGCGGTAAATATCAATA
CTGCTAGTGCTGCTGAATTGCAAGACAAGCTAGTGGGAATTGGGCAGAAAAAAGCTCAAGCGATTGTCGATTACCGTACT
AAAAACGGCAATTTTAAAAACATTGAGCAACTTGCTGAAGTCTCCGGAATTGGGCAAGCAACGGTAGAAAAAAATCGAGC
CAATATTATTTTAGAATAA
ATGAAGAAAATCAAACAACTTGGTCTAACATTCTTGTTTGGCTTAAATGCAATGGCTTTTGCCCAAACACCGCCAACTAC
AATGCCTGTTGAACAAAATGCAGTCACTCAACCCGTACAGCAAACACAAATCACCAACGCCAATGCGGTAAATATCAATA
CTGCTAGTGCTGCTGAATTGCAAGACAAGCTAGTGGGAATTGGGCAGAAAAAAGCTCAAGCGATTGTCGATTACCGTACT
AAAAACGGCAATTTTAAAAACATTGAGCAACTTGCTGAAGTCTCCGGAATTGGGCAAGCAACGGTAGAAAAAAATCGAGC
CAATATTATTTTAGAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
59.292 |
100 |
0.598 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
52.747 |
81.25 |
0.429 |
| comEA | Vibrio cholerae C6706 |
54.651 |
76.786 |
0.42 |
| comEA | Vibrio cholerae strain A1552 |
54.651 |
76.786 |
0.42 |