Detailed information
Bioinformatically predicted
Overview
| Name | comEA/comE1 | Type | Machinery gene |
| Locus tag | BG554_RS10850 | Genome accession | NZ_CP017512 |
| Coordinates | 2173819..2174157 (-) | Length | 112 a.a. |
| NCBI ID | WP_006251644.1 | Uniprot ID | A0A248ZWT2 |
| Organism | Mannheimia haemolytica strain 23558 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2168819..2179157
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BG554_RS10835 (BG554_10610) | - | 2168821..2170290 (-) | 1470 | WP_006251642.1 | HsdM family class I SAM-dependent methyltransferase | - |
| BG554_RS10840 (BG554_10615) | hsdR | 2170338..2172689 (-) | 2352 | WP_006250003.1 | EcoAI/FtnUII family type I restriction enzme subunit R | - |
| BG554_RS10845 (BG554_10620) | asd | 2172761..2173654 (-) | 894 | WP_006251643.1 | archaetidylserine decarboxylase | - |
| BG554_RS10850 (BG554_10625) | comEA/comE1 | 2173819..2174157 (-) | 339 | WP_006251644.1 | ComEA family DNA-binding protein | Machinery gene |
| BG554_RS10855 (BG554_10630) | - | 2174450..2175724 (+) | 1275 | WP_142778023.1 | LysM-like peptidoglycan-binding domain-containing protein | - |
| BG554_RS10860 (BG554_10635) | - | 2175784..2176200 (+) | 417 | WP_020824267.1 | MliC family protein | - |
| BG554_RS10865 (BG554_10640) | waaF | 2176311..2177348 (+) | 1038 | WP_020824266.1 | lipopolysaccharide heptosyltransferase II | - |
| BG554_RS10870 (BG554_10645) | rfaC | 2177416..2178375 (+) | 960 | WP_006250332.1 | lipopolysaccharide heptosyltransferase RfaC | - |
| BG554_RS10875 (BG554_10650) | rpsL | 2178496..2178870 (+) | 375 | WP_005543325.1 | 30S ribosomal protein S12 | - |
Sequence
Protein
Download Length: 112 a.a. Molecular weight: 12111.91 Da Isoelectric Point: 10.0993
>NTDB_id=199400 BG554_RS10850 WP_006251644.1 2173819..2174157(-) (comEA/comE1) [Mannheimia haemolytica strain 23558]
MKKIKQLGLTFLFGLNAMAFAQTPPTTMPVEQNAVTQPVQQTQITNANAVNINTASAAELQDKLVGIGQKKAQAIVDYRT
KNGNFKNIEQLAEVSGIGQATVEKNRANIILE
MKKIKQLGLTFLFGLNAMAFAQTPPTTMPVEQNAVTQPVQQTQITNANAVNINTASAAELQDKLVGIGQKKAQAIVDYRT
KNGNFKNIEQLAEVSGIGQATVEKNRANIILE
Nucleotide
Download Length: 339 bp
>NTDB_id=199400 BG554_RS10850 WP_006251644.1 2173819..2174157(-) (comEA/comE1) [Mannheimia haemolytica strain 23558]
ATGAAGAAAATCAAACAACTTGGTCTAACATTCTTGTTTGGCTTAAATGCAATGGCTTTTGCCCAAACACCGCCAACTAC
AATGCCTGTTGAACAAAATGCAGTCACTCAACCCGTACAGCAAACACAAATCACCAACGCCAATGCGGTAAATATCAATA
CTGCTAGTGCTGCTGAATTGCAAGACAAGCTAGTGGGAATTGGGCAGAAAAAAGCTCAAGCGATTGTCGATTACCGTACT
AAAAACGGCAATTTTAAAAACATTGAGCAACTTGCTGAAGTCTCCGGAATTGGGCAAGCAACGGTAGAAAAAAATCGAGC
CAATATTATTTTAGAATAA
ATGAAGAAAATCAAACAACTTGGTCTAACATTCTTGTTTGGCTTAAATGCAATGGCTTTTGCCCAAACACCGCCAACTAC
AATGCCTGTTGAACAAAATGCAGTCACTCAACCCGTACAGCAAACACAAATCACCAACGCCAATGCGGTAAATATCAATA
CTGCTAGTGCTGCTGAATTGCAAGACAAGCTAGTGGGAATTGGGCAGAAAAAAGCTCAAGCGATTGTCGATTACCGTACT
AAAAACGGCAATTTTAAAAACATTGAGCAACTTGCTGAAGTCTCCGGAATTGGGCAAGCAACGGTAGAAAAAAATCGAGC
CAATATTATTTTAGAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
59.292 |
100 |
0.598 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
52.747 |
81.25 |
0.429 |
| comEA | Vibrio cholerae C6706 |
54.651 |
76.786 |
0.42 |
| comEA | Vibrio cholerae strain A1552 |
54.651 |
76.786 |
0.42 |