Detailed information
Bioinformatically predicted
Overview
| Name | comEA/comE1 | Type | Machinery gene |
| Locus tag | BG584_RS12005 | Genome accession | NZ_CP017504 |
| Coordinates | 2334750..2335088 (+) | Length | 112 a.a. |
| NCBI ID | WP_006251644.1 | Uniprot ID | A0A248ZWT2 |
| Organism | Mannheimia haemolytica strain 32635 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2329750..2340088
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BG584_RS11980 (BG584_11775) | rpsL | 2329989..2330363 (-) | 375 | WP_005543325.1 | 30S ribosomal protein S12 | - |
| BG584_RS11985 (BG584_11780) | rfaC | 2330484..2331443 (-) | 960 | WP_006250332.1 | lipopolysaccharide heptosyltransferase RfaC | - |
| BG584_RS11990 (BG584_11785) | waaF | 2331510..2332547 (-) | 1038 | WP_006250331.1 | lipopolysaccharide heptosyltransferase II | - |
| BG584_RS11995 (BG584_11790) | - | 2332658..2333074 (-) | 417 | WP_006250330.1 | MliC family protein | - |
| BG584_RS12000 (BG584_11795) | - | 2333138..2334457 (-) | 1320 | WP_006253337.1 | LysM-like peptidoglycan-binding domain-containing protein | - |
| BG584_RS12005 (BG584_11800) | comEA/comE1 | 2334750..2335088 (+) | 339 | WP_006251644.1 | ComEA family DNA-binding protein | Machinery gene |
| BG584_RS12010 (BG584_11805) | asd | 2335253..2336146 (+) | 894 | WP_006250004.1 | archaetidylserine decarboxylase | - |
| BG584_RS12015 (BG584_11810) | hsdR | 2336218..2338569 (+) | 2352 | WP_006250003.1 | EcoAI/FtnUII family type I restriction enzme subunit R | - |
| BG584_RS12020 (BG584_11815) | - | 2338617..2340086 (+) | 1470 | WP_006250002.1 | HsdM family class I SAM-dependent methyltransferase | - |
Sequence
Protein
Download Length: 112 a.a. Molecular weight: 12111.91 Da Isoelectric Point: 10.0993
>NTDB_id=199212 BG584_RS12005 WP_006251644.1 2334750..2335088(+) (comEA/comE1) [Mannheimia haemolytica strain 32635]
MKKIKQLGLTFLFGLNAMAFAQTPPTTMPVEQNAVTQPVQQTQITNANAVNINTASAAELQDKLVGIGQKKAQAIVDYRT
KNGNFKNIEQLAEVSGIGQATVEKNRANIILE
MKKIKQLGLTFLFGLNAMAFAQTPPTTMPVEQNAVTQPVQQTQITNANAVNINTASAAELQDKLVGIGQKKAQAIVDYRT
KNGNFKNIEQLAEVSGIGQATVEKNRANIILE
Nucleotide
Download Length: 339 bp
>NTDB_id=199212 BG584_RS12005 WP_006251644.1 2334750..2335088(+) (comEA/comE1) [Mannheimia haemolytica strain 32635]
ATGAAGAAAATCAAACAACTTGGTCTAACATTCTTGTTTGGCTTAAATGCAATGGCTTTTGCCCAAACACCGCCAACTAC
AATGCCTGTTGAACAAAATGCAGTCACTCAACCCGTACAGCAAACACAAATCACCAACGCTAATGCGGTAAATATCAATA
CTGCTAGTGCTGCTGAATTGCAAGACAAGCTAGTGGGAATTGGGCAGAAAAAAGCTCAAGCGATTGTCGATTACCGTACT
AAAAACGGCAATTTTAAAAACATTGAGCAACTTGCTGAAGTCTCCGGAATTGGGCAAGCAACGGTAGAAAAAAATCGAGC
CAATATTATTTTAGAATAA
ATGAAGAAAATCAAACAACTTGGTCTAACATTCTTGTTTGGCTTAAATGCAATGGCTTTTGCCCAAACACCGCCAACTAC
AATGCCTGTTGAACAAAATGCAGTCACTCAACCCGTACAGCAAACACAAATCACCAACGCTAATGCGGTAAATATCAATA
CTGCTAGTGCTGCTGAATTGCAAGACAAGCTAGTGGGAATTGGGCAGAAAAAAGCTCAAGCGATTGTCGATTACCGTACT
AAAAACGGCAATTTTAAAAACATTGAGCAACTTGCTGAAGTCTCCGGAATTGGGCAAGCAACGGTAGAAAAAAATCGAGC
CAATATTATTTTAGAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
59.292 |
100 |
0.598 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
52.747 |
81.25 |
0.429 |
| comEA | Vibrio cholerae C6706 |
54.651 |
76.786 |
0.42 |
| comEA | Vibrio cholerae strain A1552 |
54.651 |
76.786 |
0.42 |