Detailed information
Bioinformatically predicted
Overview
| Name | comEA/comE1 | Type | Machinery gene |
| Locus tag | BG550_RS10885 | Genome accession | NZ_CP017488 |
| Coordinates | 2175546..2175884 (-) | Length | 112 a.a. |
| NCBI ID | WP_006251644.1 | Uniprot ID | A0A248ZWT2 |
| Organism | Mannheimia haemolytica strain 39373 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2170546..2180884
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BG550_RS10870 (BG550_10610) | - | 2170548..2172017 (-) | 1470 | WP_006251642.1 | HsdM family class I SAM-dependent methyltransferase | - |
| BG550_RS10875 (BG550_10615) | hsdR | 2172065..2174416 (-) | 2352 | WP_006250003.1 | EcoAI/FtnUII family type I restriction enzme subunit R | - |
| BG550_RS10880 (BG550_10620) | asd | 2174488..2175381 (-) | 894 | WP_006251643.1 | archaetidylserine decarboxylase | - |
| BG550_RS10885 (BG550_10625) | comEA/comE1 | 2175546..2175884 (-) | 339 | WP_006251644.1 | ComEA family DNA-binding protein | Machinery gene |
| BG550_RS10890 (BG550_10630) | - | 2176177..2177451 (+) | 1275 | WP_142778023.1 | LysM-like peptidoglycan-binding domain-containing protein | - |
| BG550_RS10895 (BG550_10635) | - | 2177511..2177927 (+) | 417 | WP_020824267.1 | MliC family protein | - |
| BG550_RS10900 (BG550_10640) | waaF | 2178038..2179072 (+) | 1035 | WP_142782976.1 | lipopolysaccharide heptosyltransferase II | - |
| BG550_RS10905 (BG550_10645) | rfaC | 2179140..2180099 (+) | 960 | WP_006250332.1 | lipopolysaccharide heptosyltransferase RfaC | - |
| BG550_RS10910 (BG550_10650) | rpsL | 2180220..2180594 (+) | 375 | WP_005543325.1 | 30S ribosomal protein S12 | - |
Sequence
Protein
Download Length: 112 a.a. Molecular weight: 12111.91 Da Isoelectric Point: 10.0993
>NTDB_id=198841 BG550_RS10885 WP_006251644.1 2175546..2175884(-) (comEA/comE1) [Mannheimia haemolytica strain 39373]
MKKIKQLGLTFLFGLNAMAFAQTPPTTMPVEQNAVTQPVQQTQITNANAVNINTASAAELQDKLVGIGQKKAQAIVDYRT
KNGNFKNIEQLAEVSGIGQATVEKNRANIILE
MKKIKQLGLTFLFGLNAMAFAQTPPTTMPVEQNAVTQPVQQTQITNANAVNINTASAAELQDKLVGIGQKKAQAIVDYRT
KNGNFKNIEQLAEVSGIGQATVEKNRANIILE
Nucleotide
Download Length: 339 bp
>NTDB_id=198841 BG550_RS10885 WP_006251644.1 2175546..2175884(-) (comEA/comE1) [Mannheimia haemolytica strain 39373]
ATGAAGAAAATCAAACAACTTGGTCTAACATTCTTGTTTGGCTTAAATGCAATGGCTTTTGCCCAAACACCGCCAACTAC
AATGCCTGTTGAACAAAATGCAGTCACTCAACCCGTACAGCAAACACAAATCACCAACGCCAATGCGGTAAATATCAATA
CTGCTAGTGCTGCTGAATTGCAAGACAAGCTAGTGGGAATTGGGCAGAAAAAAGCTCAAGCGATTGTCGATTACCGTACT
AAAAACGGCAATTTTAAAAACATTGAGCAACTTGCTGAAGTCTCCGGAATTGGGCAAGCAACGGTAGAAAAAAATCGAGC
CAATATTATTTTAGAATAA
ATGAAGAAAATCAAACAACTTGGTCTAACATTCTTGTTTGGCTTAAATGCAATGGCTTTTGCCCAAACACCGCCAACTAC
AATGCCTGTTGAACAAAATGCAGTCACTCAACCCGTACAGCAAACACAAATCACCAACGCCAATGCGGTAAATATCAATA
CTGCTAGTGCTGCTGAATTGCAAGACAAGCTAGTGGGAATTGGGCAGAAAAAAGCTCAAGCGATTGTCGATTACCGTACT
AAAAACGGCAATTTTAAAAACATTGAGCAACTTGCTGAAGTCTCCGGAATTGGGCAAGCAACGGTAGAAAAAAATCGAGC
CAATATTATTTTAGAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
59.292 |
100 |
0.598 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
52.747 |
81.25 |
0.429 |
| comEA | Vibrio cholerae C6706 |
54.651 |
76.786 |
0.42 |
| comEA | Vibrio cholerae strain A1552 |
54.651 |
76.786 |
0.42 |