Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   S101392_RS15495 Genome accession   NZ_CP021921
Coordinates   2993511..2994221 (-) Length   236 a.a.
NCBI ID   WP_015714539.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain SRCM101392     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2988511..2999221
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  S101392_RS15475 (S101392_03069) cysK 2988563..2989498 (+) 936 WP_088326751.1 cysteine synthase A -
  S101392_RS15480 (S101392_03070) pepV 2989532..2990923 (-) 1392 WP_014477689.1 dipeptidase PepV -
  S101392_RS15485 (S101392_03071) pbuO 2991020..2992318 (+) 1299 WP_014480583.1 hypoxanthine/guanine permease PbuO -
  S101392_RS15490 (S101392_03072) ythQ 2992357..2993514 (-) 1158 WP_088326753.1 ABC transporter permease -
  S101392_RS15495 (S101392_03073) pptA 2993511..2994221 (-) 711 WP_015714539.1 ABC transporter ATP-binding protein Regulator
  S101392_RS15500 (S101392_03074) ytzE 2994512..2994733 (+) 222 WP_003152337.1 DeoR family transcriptional regulator -
  S101392_RS15505 (S101392_03075) rsuA 2994854..2995573 (-) 720 WP_017695479.1 pseudouridine synthase -
  S101392_RS15510 (S101392_03076) murJ 2995642..2997276 (-) 1635 WP_014480588.1 lipid II flippase MurJ -
  S101392_RS15515 (S101392_03077) ytfP 2997479..2998741 (+) 1263 WP_003229222.1 NAD(P)/FAD-dependent oxidoreductase -

Sequence

Protein


Download         Length: 236 a.a.        Molecular weight: 26573.65 Da        Isoelectric Point: 5.5930

>NTDB_id=198503 S101392_RS15495 WP_015714539.1 2993511..2994221(-) (pptA) [Bacillus subtilis subsp. subtilis strain SRCM101392]
MTNLLEASIEQAGYTSRKKVLTDVFLEVRKGELVGLIGANGAGKSTAIKAILGLSEDFKGHIAWNDCSFAYIPEHPSFYE
ELTLWEHLDLISTLHGIEEREFAHRAQSLLQTFSLDHVKHELPVTFSKGMQQKLMLIQAFLSKPDMYVIDEPFIGLDPIS
TKRFVDMLKAEKERGAGILMCTHVLDTAEKICDRFYMIEKGSLFLQGTLKDIQDKTGLEGQSLLDCFYKAVQGDRP

Nucleotide


Download         Length: 711 bp        

>NTDB_id=198503 S101392_RS15495 WP_015714539.1 2993511..2994221(-) (pptA) [Bacillus subtilis subsp. subtilis strain SRCM101392]
TTGACAAATTTGCTTGAAGCTTCAATAGAACAGGCCGGGTATACAAGCCGAAAAAAAGTGCTCACCGATGTTTTTCTGGA
AGTCAGAAAAGGGGAACTGGTTGGACTGATCGGAGCTAACGGCGCCGGAAAAAGCACCGCAATCAAGGCGATACTCGGCC
TTTCAGAAGATTTTAAAGGGCATATTGCCTGGAACGACTGTTCATTTGCATATATTCCGGAGCATCCGTCCTTCTACGAA
GAACTGACGCTGTGGGAGCATTTGGATCTGATCAGCACACTCCACGGCATTGAAGAGAGGGAATTTGCGCATCGGGCCCA
AAGCCTGCTGCAGACGTTTTCGCTAGATCATGTCAAACATGAGCTGCCTGTCACCTTTTCGAAGGGCATGCAGCAAAAAC
TAATGCTTATCCAGGCCTTTCTCTCTAAGCCGGATATGTATGTGATTGATGAACCGTTTATCGGCCTTGATCCGATATCG
ACGAAACGCTTTGTGGACATGCTTAAGGCTGAAAAAGAACGTGGAGCCGGAATTCTTATGTGCACGCATGTACTCGATAC
CGCGGAAAAAATCTGTGACCGGTTTTATATGATTGAGAAAGGTTCATTATTTCTCCAAGGCACGTTAAAAGATATTCAGG
ACAAGACCGGATTAGAGGGGCAGTCATTGCTTGACTGTTTTTATAAGGCAGTTCAAGGTGATCGGCCATGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(21-153)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

44.017

99.153

0.436
  pptA Streptococcus thermophilus LMD-9

43.59

99.153

0.432

Multiple sequence alignment