Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | BIZ51_RS05140 | Genome accession | NZ_CP017458 |
| Coordinates | 1131046..1131645 (+) | Length | 199 a.a. |
| NCBI ID | WP_027221266.1 | Uniprot ID | - |
| Organism | Legionella pneumophila subsp. fraseri strain Dallas 1E | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1126046..1136645
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BIZ51_RS05125 (BIZ51_05050) | ravI | 1127990..1128997 (-) | 1008 | WP_027227632.1 | Dot/Icm T4SS effector RavI | - |
| BIZ51_RS05130 (BIZ51_05055) | pilM | 1129416..1130480 (+) | 1065 | WP_027227633.1 | type IV pilus assembly protein PilM | Machinery gene |
| BIZ51_RS05135 (BIZ51_05060) | pilN | 1130484..1131032 (+) | 549 | WP_027227634.1 | PilN domain-containing protein | Machinery gene |
| BIZ51_RS05140 (BIZ51_05065) | pilO | 1131046..1131645 (+) | 600 | WP_027221266.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| BIZ51_RS05145 (BIZ51_05070) | pilP | 1131642..1132226 (+) | 585 | WP_027227635.1 | pilus assembly protein PilP | Machinery gene |
| BIZ51_RS05150 (BIZ51_05075) | pilQ | 1132230..1134326 (+) | 2097 | WP_027227636.1 | type IV pilus secretin PilQ | Machinery gene |
| BIZ51_RS05155 (BIZ51_05080) | aroK | 1134772..1135299 (+) | 528 | WP_010946667.1 | shikimate kinase AroK | - |
| BIZ51_RS05160 (BIZ51_05085) | aroB | 1135286..1136389 (+) | 1104 | WP_027227637.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 199 a.a. Molecular weight: 22441.13 Da Isoelectric Point: 5.3305
>NTDB_id=198401 BIZ51_RS05140 WP_027221266.1 1131046..1131645(+) (pilO) [Legionella pneumophila subsp. fraseri strain Dallas 1E]
MDTVNLSELTLENVGQWPMPVKIGVILGISILIIGLGYWLIVKPNFEQLDTLEAQEIALKTEFEKKQHQAANLQAYRNQL
QLMNERFGTMLKQLPAKNEMPGLLEEISKTGIASGLKFELFAPQPEVVHDFYVELPIKITIVGSYMQLARFLSRVAEMNR
IVTLHEFSVEGVSSGDGKTVSQDELVMGITAKIYRYRAQ
MDTVNLSELTLENVGQWPMPVKIGVILGISILIIGLGYWLIVKPNFEQLDTLEAQEIALKTEFEKKQHQAANLQAYRNQL
QLMNERFGTMLKQLPAKNEMPGLLEEISKTGIASGLKFELFAPQPEVVHDFYVELPIKITIVGSYMQLARFLSRVAEMNR
IVTLHEFSVEGVSSGDGKTVSQDELVMGITAKIYRYRAQ
Nucleotide
Download Length: 600 bp
>NTDB_id=198401 BIZ51_RS05140 WP_027221266.1 1131046..1131645(+) (pilO) [Legionella pneumophila subsp. fraseri strain Dallas 1E]
ATGGATACAGTCAATTTAAGTGAATTAACTCTGGAGAATGTCGGCCAGTGGCCAATGCCGGTTAAAATCGGAGTCATTTT
AGGCATCAGTATATTGATAATTGGATTGGGATATTGGCTTATTGTTAAGCCTAATTTTGAGCAATTGGATACACTGGAAG
CCCAGGAAATTGCTTTGAAAACAGAGTTTGAAAAAAAACAACATCAGGCAGCAAATCTACAAGCCTATCGTAATCAGTTA
CAGTTAATGAATGAACGCTTCGGAACCATGCTAAAACAACTACCGGCAAAAAATGAAATGCCTGGTCTTTTGGAAGAAAT
ATCTAAAACAGGGATCGCATCGGGTTTGAAATTTGAATTGTTTGCACCACAACCTGAAGTAGTGCATGATTTTTATGTGG
AGTTACCTATAAAAATTACGATTGTCGGATCCTATATGCAATTAGCAAGATTTTTAAGTCGTGTCGCTGAAATGAACAGA
ATCGTGACTCTGCATGAATTTAGTGTTGAGGGGGTATCCTCCGGGGATGGTAAAACGGTCTCTCAGGATGAATTGGTGAT
GGGTATCACCGCTAAAATATACAGATATCGGGCACAATGA
ATGGATACAGTCAATTTAAGTGAATTAACTCTGGAGAATGTCGGCCAGTGGCCAATGCCGGTTAAAATCGGAGTCATTTT
AGGCATCAGTATATTGATAATTGGATTGGGATATTGGCTTATTGTTAAGCCTAATTTTGAGCAATTGGATACACTGGAAG
CCCAGGAAATTGCTTTGAAAACAGAGTTTGAAAAAAAACAACATCAGGCAGCAAATCTACAAGCCTATCGTAATCAGTTA
CAGTTAATGAATGAACGCTTCGGAACCATGCTAAAACAACTACCGGCAAAAAATGAAATGCCTGGTCTTTTGGAAGAAAT
ATCTAAAACAGGGATCGCATCGGGTTTGAAATTTGAATTGTTTGCACCACAACCTGAAGTAGTGCATGATTTTTATGTGG
AGTTACCTATAAAAATTACGATTGTCGGATCCTATATGCAATTAGCAAGATTTTTAAGTCGTGTCGCTGAAATGAACAGA
ATCGTGACTCTGCATGAATTTAGTGTTGAGGGGGTATCCTCCGGGGATGGTAAAACGGTCTCTCAGGATGAATTGGTGAT
GGGTATCACCGCTAAAATATACAGATATCGGGCACAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Legionella pneumophila strain ERS1305867 |
97.487 |
100 |
0.975 |
| comO | Acinetobacter baylyi ADP1 |
39.894 |
94.472 |
0.377 |
| pilO | Acinetobacter baumannii D1279779 |
38.22 |
95.98 |
0.367 |