Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   BI364_RS01405 Genome accession   NZ_CP017415
Coordinates   282810..283157 (+) Length   115 a.a.
NCBI ID   WP_070079811.1    Uniprot ID   A0A1D8ISR5
Organism   Acidihalobacter yilgarnensis strain F5     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 277810..288157
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BI364_RS01375 (BI364_01375) - 278017..279018 (-) 1002 WP_070077227.1 aspartate carbamoyltransferase catalytic subunit -
  BI364_RS01380 (BI364_01380) pyrR 279015..279542 (-) 528 WP_070077228.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  BI364_RS01385 (BI364_01385) ruvX 279539..279982 (-) 444 WP_197495794.1 Holliday junction resolvase RuvX -
  BI364_RS01390 (BI364_01390) - 280022..280585 (-) 564 WP_070079810.1 YqgE/AlgH family protein -
  BI364_RS01395 (BI364_01395) - 280653..281546 (-) 894 WP_070077230.1 energy transducer TonB -
  BI364_RS01400 (BI364_01400) gshB 281624..282574 (-) 951 WP_070077231.1 glutathione synthase -
  BI364_RS01405 (BI364_01405) pilG 282810..283157 (+) 348 WP_070079811.1 response regulator Regulator
  BI364_RS01410 (BI364_01410) - 283271..283636 (+) 366 WP_070077232.1 PleD family two-component system response regulator -
  BI364_RS01415 (BI364_01415) - 283654..284199 (+) 546 WP_070077233.1 chemotaxis protein CheW -
  BI364_RS01420 (BI364_01420) - 284273..286360 (+) 2088 WP_070077234.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 115 a.a.        Molecular weight: 13007.11 Da        Isoelectric Point: 7.7865

>NTDB_id=197983 BI364_RS01405 WP_070079811.1 282810..283157(+) (pilG) [Acidihalobacter yilgarnensis strain F5]
MVIDDSKTIRRTAETLLKKEGCEVVTANDGFEALAKIAEFRPDIVFVDIMMPRLDGYQTCALIKQNGAFRKTPVIMLSSK
DSIFDKARGRIVGSEEYLTKPFTRDDLLDAIRKFT

Nucleotide


Download         Length: 348 bp        

>NTDB_id=197983 BI364_RS01405 WP_070079811.1 282810..283157(+) (pilG) [Acidihalobacter yilgarnensis strain F5]
ATGGTGATCGATGATAGTAAAACCATCCGACGGACCGCCGAAACCCTGCTTAAGAAAGAGGGCTGTGAGGTGGTGACCGC
CAACGACGGTTTTGAGGCGCTGGCCAAGATTGCGGAGTTTCGCCCAGACATCGTATTTGTCGATATCATGATGCCACGGC
TGGATGGGTATCAGACTTGTGCCCTGATCAAGCAGAATGGCGCCTTCCGTAAGACACCGGTGATCATGCTTTCGAGTAAA
GACAGCATTTTCGATAAAGCGCGCGGCCGTATCGTTGGGTCGGAGGAATATCTGACCAAGCCCTTTACGCGAGACGATTT
ACTCGACGCGATCAGAAAATTTACATGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(1-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1D8ISR5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76.316

99.13

0.757
  vicR Streptococcus mutans UA159

41.071

97.391

0.4
  pilH Synechocystis sp. PCC 6803

39.474

99.13

0.391
  micA Streptococcus pneumoniae Cp1015

40.187

93.043

0.374

Multiple sequence alignment