Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   BB159_RS06830 Genome accession   NZ_CP021868
Coordinates   1325035..1325475 (-) Length   146 a.a.
NCBI ID   WP_000431168.1    Uniprot ID   R4Z9I5
Organism   Streptococcus agalactiae strain SG-M8     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1320035..1330475
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BB159_RS06815 (BB159_06815) - 1320693..1321319 (-) 627 WP_000449644.1 GTP pyrophosphokinase -
  BB159_RS06820 (BB159_06820) rcrQ 1321427..1323181 (-) 1755 WP_000851087.1 ABC transporter ATP-binding protein Regulator
  BB159_RS06825 (BB159_06825) rcrP 1323171..1324988 (-) 1818 WP_000481813.1 ABC transporter ATP-binding protein Regulator
  BB159_RS06830 (BB159_06830) rcrR 1325035..1325475 (-) 441 WP_000431168.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  BB159_RS06835 (BB159_06835) - 1325745..1327817 (+) 2073 Protein_1260 surface-anchored 5'-nucleotidase -
  BB159_RS06840 (BB159_06840) - 1327854..1328264 (-) 411 WP_000594935.1 peptide deformylase -
  BB159_RS06845 (BB159_06845) gdhA 1328334..1329683 (-) 1350 WP_000200435.1 NADP-specific glutamate dehydrogenase -
  BB159_RS06850 (BB159_06850) - 1329851..1330360 (+) 510 WP_000870956.1 HdeD family acid-resistance protein -

Sequence

Protein


Download         Length: 146 a.a.        Molecular weight: 16968.84 Da        Isoelectric Point: 9.8384

>NTDB_id=197447 BB159_RS06830 WP_000431168.1 1325035..1325475(-) (rcrR) [Streptococcus agalactiae strain SG-M8]
MENPLQKARILVNQLEKYLDRYAKEYDVEHLAGPQGHLVMHLYKHPDKDMSIKDAEEILHISKSVASNLVKRMEKNGFIA
IVPSKTDKRVKYLYLTHLGKQKATQFEIFLEKLHSTMLAGITKEEIRTTKKVIRTLAKNMAMEDFD

Nucleotide


Download         Length: 441 bp        

>NTDB_id=197447 BB159_RS06830 WP_000431168.1 1325035..1325475(-) (rcrR) [Streptococcus agalactiae strain SG-M8]
ATGGAGAATCCTCTTCAAAAAGCACGAATACTTGTTAATCAACTTGAAAAGTATTTAGATCGTTATGCAAAAGAGTATGA
TGTTGAACATTTAGCGGGTCCACAAGGACACTTAGTGATGCATCTCTATAAACATCCTGACAAGGATATGTCTATAAAAG
ATGCTGAAGAAATTTTACACATTTCTAAGTCTGTAGCGTCTAATTTGGTAAAACGGATGGAAAAAAATGGATTTATTGCG
ATTGTTCCATCTAAGACAGATAAGCGTGTGAAATACCTTTATTTGACTCATCTAGGTAAACAAAAGGCTACACAATTTGA
AATTTTCTTAGAAAAATTGCACAGTACCATGTTAGCAGGTATTACTAAAGAAGAGATACGTACTACCAAAAAGGTTATTA
GAACATTAGCTAAAAATATGGCGATGGAAGATTTTGATTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(33-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  PDB 7DVS

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

42.857

95.89

0.411

Multiple sequence alignment