Detailed information NTG0197016

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: BFO62_RS10815
• Genome accession: NZ_CP017257
• Coordinates: 1881490..1882350 (+)
• Length: 286 a.a.
• NCBI ID: WP_076612606.1
• Uniprot ID: -
• Organism: Neisseria meningitidis strain COL-201504-11
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1876490..1887350

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BFO62_RS10795 (BFO62_09750)	dapD	1876999..1877820 (-)	822	WP_002220281.1	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	-
BFO62_RS10800 (BFO62_09755)	-	1877830..1878060 (-)	231	WP_025458514.1	hypothetical protein	-
BFO62_RS10805 (BFO62_09760)	pgi	1878030..1879673 (-)	1644	WP_002220279.1	glucose-6-phosphate isomerase	-
BFO62_RS10810 (BFO62_09765)	pilG	1880183..1881415 (+)	1233	WP_076612607.1	type 4 pilus assembly protein PilG	Machinery gene
BFO62_RS10815 (BFO62_09770)	pilD	1881490..1882350 (+)	861	WP_076612606.1	prepilin peptidase	Machinery gene
BFO62_RS10820 (BFO62_09775)	coaE	1882352..1882984 (+)	633	WP_076612605.1	dephospho-CoA kinase	-
BFO62_RS10825 (BFO62_09780)	-	1882977..1883186 (+)	210	WP_076612604.1	DNA gyrase inhibitor YacG	-
BFO62_RS10830 (BFO62_09785)	pilF	1883271..1884947 (-)	1677	WP_076612603.1	type IV-A pilus assembly ATPase PilB	Machinery gene
BFO62_RS10840 (BFO62_09795)	-	1885439..1885885 (-)	447	WP_002220271.1	DUF441 domain-containing protein	-
BFO62_RS10845 (BFO62_09800)	ispB	1885890..1886864 (-)	975	WP_002220270.1	octaprenyl diphosphate synthase	-

Sequence

Protein

• Length: 286 a.a.
• Molecular weight: 31239.16 Da
• Isoelectric Point: 8.4770

>NTDB_id=197016 BFO62_RS10815 WP_076612606.1 1881490..1882350(+) (pilD) [Neisseria meningitidis strain COL-201504-11]
MSDLSVLSPFAVPLAAVFGLLVGSFLNVVIYRVPVMMERGWTVFAKEHLNLPLTDEESRTFNLMKPDSCCPKCRVPIRAW
QNIPIVSYLLLRGKCASCQTKISIRYPSIELLTGVLFGLVAWQYGWSWITLGGLVLTAFLISLTFIDADTQYLPDSMTLP
LIWLGLIFNLDGGFVPLQSAVLGAVAGYGSLWLLCAVYKLLTGKTGMGNGDFKLIAALGAWLGISALPVLIFVSSLIGLV
AAIVMRVAKGQHFAFGPALTVSGWIIFTANDSVWRAVNWWLTHPVL

Nucleotide

• Length: 861 bp

>NTDB_id=197016 BFO62_RS10815 WP_076612606.1 1881490..1882350(+) (pilD) [Neisseria meningitidis strain COL-201504-11]
ATGTCTGATTTGTCTGTATTGTCGCCGTTTGCCGTGCCTTTGGCAGCAGTTTTCGGTTTATTGGTCGGAAGTTTCTTAAA
CGTCGTCATTTACCGCGTGCCGGTCATGATGGAACGCGGCTGGACGGTATTTGCCAAAGAACATTTAAACCTGCCGCTGA
CCGACGAGGAAAGCCGTACCTTCAACCTGATGAAGCCGGATTCCTGCTGTCCAAAATGCCGTGTGCCGATACGCGCGTGG
CAGAACATCCCGATTGTCAGCTACCTGCTCCTGCGCGGCAAATGCGCCTCCTGCCAAACCAAAATCAGCATACGCTACCC
CTCTATCGAGCTGCTGACCGGCGTATTGTTCGGGCTGGTCGCCTGGCAATACGGCTGGTCTTGGATTACGCTGGGCGGAT
TGGTACTGACCGCGTTTCTGATTTCCCTGACCTTTATCGATGCGGACACCCAATACCTGCCCGACTCGATGACACTGCCC
TTGATTTGGCTGGGGCTGATATTTAATTTGGACGGCGGCTTCGTGCCTTTGCAGTCTGCCGTTTTAGGTGCGGTCGCCGG
CTATGGTTCATTATGGCTCTTATGTGCAGTGTATAAACTGCTCACAGGAAAAACCGGTATGGGCAACGGAGATTTCAAAC
TGATTGCCGCATTGGGCGCGTGGCTCGGCATATCCGCATTGCCCGTGCTGATTTTTGTTTCCTCGCTGATCGGTTTGGTC
GCGGCAATCGTTATGCGCGTCGCCAAGGGGCAGCATTTTGCCTTCGGCCCCGCACTGACAGTTTCGGGCTGGATAATTTT
TACGGCAAACGATTCCGTATGGCGGGCGGTCAACTGGTGGCTGACCCATCCGGTGCTGTAA

Domains

Predicted by InterproScan.

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (17-124)

• Type IV leader peptidase family (Peptidase_A24) (134-242)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Neisseria gonorrhoeae MS11	97.895	99.65	0.976
pilD	Vibrio cholerae strain A1552	45.486	100	0.458
pilD	Acinetobacter baumannii D1279779	48.485	92.308	0.448
pilD	Acinetobacter nosocomialis M2	48.485	92.308	0.448
pilD	Vibrio campbellii strain DS40M4	45.652	96.503	0.441