Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Machinery gene
Locus tag   BFO62_RS10810 Genome accession   NZ_CP017257
Coordinates   1880183..1881415 (+) Length   410 a.a.
NCBI ID   WP_076612607.1    Uniprot ID   -
Organism   Neisseria meningitidis strain COL-201504-11     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1875183..1886415
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BFO62_RS10790 (BFO62_09745) fabI 1876059..1876844 (-) 786 WP_002212340.1 enoyl-ACP reductase FabI -
  BFO62_RS10795 (BFO62_09750) dapD 1876999..1877820 (-) 822 WP_002220281.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase -
  BFO62_RS10800 (BFO62_09755) - 1877830..1878060 (-) 231 WP_025458514.1 hypothetical protein -
  BFO62_RS10805 (BFO62_09760) pgi 1878030..1879673 (-) 1644 WP_002220279.1 glucose-6-phosphate isomerase -
  BFO62_RS10810 (BFO62_09765) pilG 1880183..1881415 (+) 1233 WP_076612607.1 type 4 pilus assembly protein PilG Machinery gene
  BFO62_RS10815 (BFO62_09770) pilD 1881490..1882350 (+) 861 WP_076612606.1 prepilin peptidase Machinery gene
  BFO62_RS10820 (BFO62_09775) coaE 1882352..1882984 (+) 633 WP_076612605.1 dephospho-CoA kinase -
  BFO62_RS10825 (BFO62_09780) - 1882977..1883186 (+) 210 WP_076612604.1 DNA gyrase inhibitor YacG -
  BFO62_RS10830 (BFO62_09785) pilF 1883271..1884947 (-) 1677 WP_076612603.1 type IV-A pilus assembly ATPase PilB Machinery gene
  BFO62_RS10840 (BFO62_09795) - 1885439..1885885 (-) 447 WP_002220271.1 DUF441 domain-containing protein -

Sequence

Protein


Download         Length: 410 a.a.        Molecular weight: 45241.25 Da        Isoelectric Point: 9.9273

>NTDB_id=197015 BFO62_RS10810 WP_076612607.1 1880183..1881415(+) (pilG) [Neisseria meningitidis strain COL-201504-11]
MAKNGGLSLFSKKEKRFIFEGRHSASDKLVNGEVSAFTEEEARKKLAKRGIRPLQITRVKTSSKRKITQEDITVFTRQLS
TMIKAGLPLMQAFEIVARGHGNPSMTEMLMEIRGEVEQGSSLSRAFSNHPKYFDRFYCNLVAAGETGGVLESLLDKLAIY
KEKTQAIRKKVKTALTYPVSVIAVAIGLVFVMMIFVLPAFKEVYANMGAELPALTQTVMDMSDFFVSYGWMVLIALGFAI
YGFLKLKARSIKIQRRMDAILLRMPIFGDIVRKGTIARWGRTTATLIAAGVPLVDVLDSTAGAAGNLIYEEATREIRTRV
IQGLSMTSGMRATELFPNMMLQMSSIGEESGSLDDMLNKAAEFYEDEVDNAVGRLSAMMEPIIIVILGLVIGTLLVAMYL
PLFNLGNVVG

Nucleotide


Download         Length: 1233 bp        

>NTDB_id=197015 BFO62_RS10810 WP_076612607.1 1880183..1881415(+) (pilG) [Neisseria meningitidis strain COL-201504-11]
ATGGCTAAAAACGGAGGACTTTCTTTATTTTCAAAGAAAGAAAAACGCTTTATCTTTGAAGGCAGGCATTCCGCCTCCGA
CAAACTGGTCAACGGCGAAGTATCCGCGTTTACCGAAGAAGAGGCGCGCAAAAAACTGGCAAAACGCGGCATCCGCCCGT
TGCAGATTACCCGTGTGAAAACAAGCTCCAAGCGCAAAATCACACAAGAAGACATCACCGTTTTCACCCGCCAGCTGTCC
ACGATGATTAAAGCGGGCCTGCCGCTGATGCAGGCATTTGAAATCGTGGCGCGCGGACACGGCAACCCGTCTATGACGGA
AATGCTGATGGAAATCCGAGGCGAAGTGGAACAGGGCAGCTCGTTGAGCCGCGCATTCTCAAATCACCCGAAATATTTCG
ACCGCTTCTACTGCAACCTGGTTGCGGCGGGCGAAACGGGCGGCGTATTGGAAAGCCTGCTGGACAAATTGGCAATTTAC
AAAGAAAAAACCCAGGCCATCCGCAAAAAGGTAAAAACCGCGCTGACCTATCCGGTATCCGTCATCGCCGTCGCCATCGG
TTTGGTATTCGTGATGATGATTTTCGTACTGCCCGCCTTTAAAGAAGTTTACGCCAATATGGGCGCGGAGCTTCCCGCAC
TGACCCAAACAGTGATGGATATGTCCGACTTTTTCGTCTCATACGGCTGGATGGTGCTGATCGCACTGGGCTTTGCCATA
TACGGCTTCCTTAAATTGAAGGCGCGTTCGATTAAAATCCAACGGCGTATGGATGCCATACTGCTGCGTATGCCGATTTT
CGGAGACATTGTCCGCAAAGGGACGATTGCCCGCTGGGGCAGGACGACGGCGACGCTGATTGCGGCAGGCGTGCCTTTGG
TCGATGTATTGGACTCCACTGCCGGCGCGGCGGGCAATTTAATCTATGAAGAAGCCACCCGGGAAATCCGTACGCGCGTC
ATCCAAGGTTTGTCTATGACTTCGGGGATGCGTGCGACGGAACTGTTCCCCAATATGATGTTGCAGATGTCTTCCATCGG
CGAGGAATCGGGTTCTTTGGACGATATGCTCAACAAAGCCGCCGAATTTTACGAAGACGAGGTGGACAATGCGGTCGGCA
GGCTGTCCGCTATGATGGAGCCGATCATTATCGTGATTTTAGGCTTGGTCATCGGTACGCTTCTGGTCGCCATGTATCTG
CCGCTGTTTAATTTGGGTAACGTGGTCGGCTGA

Domains

Predicted by InterproScan.

Type II secretion system (T2SS), protein F (T2SSF)

(75-198)

Type II secretion system (T2SS), protein F (T2SSF)

(281-401)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Neisseria gonorrhoeae MS11

98.778

99.756

0.985
  pilG Neisseria meningitidis 44/76-A

97.805

100

0.978
  pilC Acinetobacter baumannii D1279779

47.487

97.073

0.461
  pilC Acinetobacter baylyi ADP1

45.614

97.317

0.444
  pilC Pseudomonas stutzeri DSM 10701

44.888

97.805

0.439
  pilC Legionella pneumophila strain ERS1305867

44.836

96.829

0.434
  pilC Vibrio cholerae strain A1552

41.191

98.293

0.405
  pilC Vibrio campbellii strain DS40M4

39.454

98.293

0.388

Multiple sequence alignment