Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   CDG41_RS02720 Genome accession   NZ_CP021774
Coordinates   583911..584318 (+) Length   135 a.a.
NCBI ID   WP_087930942.1    Uniprot ID   -
Organism   Pseudomonas aeruginosa strain Pa124     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 578911..589318
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CDG41_RS02690 (CDG41_02685) - 578959..579963 (-) 1005 WP_003084569.1 aspartate carbamoyltransferase catalytic subunit -
  CDG41_RS02695 (CDG41_02690) pyrR 579987..580499 (-) 513 WP_003084574.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  CDG41_RS02700 (CDG41_02695) ruvX 580611..581045 (-) 435 WP_003084575.1 Holliday junction resolvase RuvX -
  CDG41_RS02705 (CDG41_02700) - 581045..581614 (-) 570 WP_003084577.1 YqgE/AlgH family protein -
  CDG41_RS02710 (CDG41_02705) - 581663..582556 (-) 894 WP_003084580.1 TonB family protein -
  CDG41_RS02715 (CDG41_02710) gshB 582703..583656 (-) 954 WP_003100943.1 glutathione synthase -
  CDG41_RS02720 (CDG41_02715) pilG 583911..584318 (+) 408 WP_087930942.1 twitching motility response regulator PilG Regulator
  CDG41_RS02725 (CDG41_02720) pilH 584365..584730 (+) 366 WP_003084587.1 twitching motility response regulator PilH Machinery gene
  CDG41_RS02730 (CDG41_02725) - 584781..585317 (+) 537 WP_003084590.1 chemotaxis protein CheW -
  CDG41_RS02735 (CDG41_02730) pilJ 585402..587450 (+) 2049 WP_003084592.1 chemotaxis chemoreceptor PilJ -
  CDG41_RS02740 (CDG41_02735) pilK 587511..588386 (+) 876 WP_003084594.1 type 4 fimbrial methyltransferase PilK -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14704.09 Da        Isoelectric Point: 7.1340

>NTDB_id=196282 CDG41_RS02720 WP_087930942.1 583911..584318(+) (pilG) [Pseudomonas aeruginosa strain Pa124]
MEQQSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADSHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPSFTPVDAVS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=196282 CDG41_RS02720 WP_087930942.1 583911..584318(+) (pilG) [Pseudomonas aeruginosa strain Pa124]
ATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACACTGCT
GAAAAAGGTCGGTTGCGACGTGATCACGGCAATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATTCCCATCCGAACA
TCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCGTTCAAG
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTA
CCTCACCAAGCCGTTCAGCAAGGAAGAGCTGCTGGGCGCGATCAAGGCACACGTACCCAGCTTCACCCCGGTGGACGCCG
TTTCCTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.803

94.074

0.704
  vicR Streptococcus mutans UA159

44.444

86.667

0.385

Multiple sequence alignment