Detailed information NTG0196120

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: DU202_RS19010
• Genome accession: NZ_CP017152
• Coordinates: 3872687..3873745 (-)
• Length: 352 a.a.
• NCBI ID: WP_004644147.1
• Uniprot ID: A0A7U3Y305
• Organism: Acinetobacter baumannii DU202
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3867687..3878745

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DU202_RS18985 (DU202_03842)	aroK	3867962..3868531 (-)	570	WP_000643712.1	shikimate kinase AroK	-
DU202_RS18990 (DU202_03843)	pilQ	3868543..3870708 (-)	2166	WP_001017033.1	type IV pilus secretin PilQ family protein	Machinery gene
DU202_RS18995 (DU202_03844)	pilP	3870771..3871298 (-)	528	WP_000695065.1	pilus assembly protein PilP	Machinery gene
DU202_RS19000 (DU202_03845)	pilO	3871309..3872049 (-)	741	WP_000076099.1	type 4a pilus biogenesis protein PilO	Machinery gene
DU202_RS19005 (DU202_03846)	pilN	3872046..3872687 (-)	642	WP_000201227.1	PilN domain-containing protein	Machinery gene
DU202_RS19010 (DU202_03847)	pilM	3872687..3873745 (-)	1059	WP_004644147.1	pilus assembly protein PilM	Machinery gene
DU202_RS19015 (DU202_03848)	ponA	3873907..3876462 (+)	2556	WP_000736667.1	penicillin-binding protein PBP1a	-
DU202_RS19020 (DU202_03849)	-	3876480..3877304 (-)	825	WP_002022249.1	putative RNA methyltransferase	-
DU202_RS19025 (DU202_03850)	-	3877307..3877639 (-)	333	WP_000169602.1	DUF7709 family protein	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39062.61 Da
• Isoelectric Point: 4.4618

>NTDB_id=196120 DU202_RS19010 WP_004644147.1 3872687..3873745(-) (pilM) [Acinetobacter baumannii DU202]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLTNPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=196120 DU202_RS19010 WP_004644147.1 3872687..3873745(-) (pilM) [Acinetobacter baumannii DU202]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCGGATCGTCTTA
CGAATCCAAATCGTGTAAATGTGCTCTTGGTCGCCACAAGAACAGAAAACGTTGAAACACGCGTTGAAGTGCTTGAATTG
GCAGATTTAAATCCTAAATTGGCTGATGTCGAAAGTTACGCGGTTGAGCGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATGGGTGCAAATACCATAGGGATTTTAGATATCGGCCATACCATGACGACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTTTTCGGCGGAAAACAACTTACGCTTGAAATTCAAAGTCGTTATGGTTTGTCTTTAGAAGAA
GCAAGCAGAGCGAAAAAAGATCGTTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
TCAGCAGGCGGCCCGCTCACTACAATTTTTCTTTTCTTCATCCCAATTTAACGAAATAGACCATATTTTGCTCGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCCAAGCTTTTGCAGCAAAAATTAGGTTACCGTGTCACGATTGCCAACCCGTTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: A0A7U3Y305

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	99.716	100	0.997
comM	Acinetobacter nosocomialis M2	99.148	100	0.991
comM	Acinetobacter baylyi ADP1	81.25	100	0.813
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423