Detailed information NTG0196110

Bioinformatically predicted

Overview

• Name: pilY2
• Type: Machinery gene
• Locus tag: DU202_RS18865
• Genome accession: NZ_CP017152
• Coordinates: 3838812..3839294 (-)
• Length: 160 a.a.
• NCBI ID: WP_001046420.1
• Uniprot ID: A0A7U3Y2Y6
• Organism: Acinetobacter baumannii DU202
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3833812..3844294

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DU202_RS18830 (DU202_03810)	-	3833918..3834952 (+)	1035	WP_001189447.1	lipase secretion chaperone	-
DU202_RS18835 (DU202_03811)	-	3835067..3836008 (+)	942	WP_085916958.1	lipase family alpha/beta hydrolase	-
DU202_RS18840 (DU202_03812)	rplS	3836061..3836429 (-)	369	WP_000014562.1	50S ribosomal protein L19	-
DU202_RS18845 (DU202_03813)	trmD	3836638..3837378 (-)	741	WP_000464598.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
DU202_RS18850 (DU202_03814)	rimM	3837424..3837972 (-)	549	WP_000189236.1	ribosome maturation factor RimM	-
DU202_RS18855 (DU202_03815)	rpsP	3837992..3838243 (-)	252	WP_000260334.1	30S ribosomal protein S16	-
DU202_RS18860 (DU202_03816)	pilE	3838390..3838815 (-)	426	WP_000788342.1	type IV pilin protein	Machinery gene
DU202_RS18865 (DU202_03817)	pilY2	3838812..3839294 (-)	483	WP_001046420.1	type IV pilin protein	Machinery gene
DU202_RS18870	-	3839307..3843160 (-)	3854	Protein_3725	PilC/PilY family type IV pilus protein	-
DU202_RS18875 (DU202_03820)	pilX	3843172..3843990 (-)	819	WP_000149374.1	PilX N-terminal domain-containing pilus assembly protein	Machinery gene

Sequence

Protein

• Length: 160 a.a.
• Molecular weight: 17548.77 Da
• Isoelectric Point: 8.4817

>NTDB_id=196110 DU202_RS18865 WP_001046420.1 3838812..3839294(-) (pilY2) [Acinetobacter baumannii DU202]
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNSASNGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGTVTCNVCETNSENWQ

Nucleotide

• Length: 483 bp

>NTDB_id=196110 DU202_RS18865 WP_001046420.1 3838812..3839294(-) (pilY2) [Acinetobacter baumannii DU202]
ATGAATAAGTACTCTATTCTACGGTTCAATCAAGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAAATTACTGATGATACGACCACAGGTAATTTATTAACAAATTCTGCTTCTAATGGTCAAAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAACTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGTCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAACAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA

Domains

Predicted by InterproScan.

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (34-135)

• Prokaryotic N-terminal methylation motif (N_methyl) (10-32)

3D structure

• AlphaFold DB: A0A7U3Y2Y6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilY2	Acinetobacter baumannii D1279779	97.5	100	0.975
comE	Acinetobacter baylyi ADP1	40.116	100	0.431