Detailed information    

insolico Bioinformatically predicted

Overview

Name   comGC   Type   Machinery gene
Locus tag   BGM23_RS09735 Genome accession   NZ_CP017072
Coordinates   1855010..1855306 (+) Length   98 a.a.
NCBI ID   WP_029726719.1    Uniprot ID   -
Organism   Bacillus sp. FJAT-14266     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1850010..1860306
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BGM23_RS09705 (BGM23_09705) - 1850066..1851394 (-) 1329 WP_029726716.1 hemolysin family protein -
  BGM23_RS09710 (BGM23_09710) corA 1851537..1852490 (+) 954 WP_004399136.1 magnesium transporter CorA -
  BGM23_RS09715 (BGM23_09715) - 1852492..1852689 (+) 198 WP_029726717.1 hypothetical protein -
  BGM23_RS09725 (BGM23_09725) comGA 1852902..1853972 (+) 1071 WP_004399124.1 competence protein ComGA Machinery gene
  BGM23_RS09730 (BGM23_09730) comGB 1853959..1854996 (+) 1038 WP_029726718.1 comG operon protein ComGB Machinery gene
  BGM23_RS09735 (BGM23_09735) comGC 1855010..1855306 (+) 297 WP_029726719.1 comG operon protein ComGC Machinery gene
  BGM23_RS09740 (BGM23_09740) comGD 1855296..1855727 (+) 432 WP_029726720.1 comG operon protein ComGD Machinery gene
  BGM23_RS09745 (BGM23_09745) comGE 1855711..1856058 (+) 348 WP_014480255.1 ComG operon protein 5 Machinery gene
  BGM23_RS09750 (BGM23_09750) comGF 1856084..1856467 (+) 384 WP_029726721.1 ComG operon protein ComGF Machinery gene
  BGM23_RS09755 (BGM23_09755) comGG 1856468..1856842 (+) 375 WP_029726722.1 ComG operon protein ComGG Machinery gene
  BGM23_RS09760 (BGM23_09760) - 1856914..1857093 (+) 180 WP_029726723.1 YqzE family protein -
  BGM23_RS09765 (BGM23_09765) - 1857135..1857461 (-) 327 WP_003246051.1 YqzG/YhdC family protein -
  BGM23_RS09770 (BGM23_09770) tapA 1857733..1858494 (+) 762 WP_029726724.1 amyloid fiber anchoring/assembly protein TapA -
  BGM23_RS09775 (BGM23_09775) - 1858478..1859050 (+) 573 WP_072692741.1 signal peptidase I -
  BGM23_RS09780 (BGM23_09780) tasA 1859114..1859899 (+) 786 WP_014664586.1 biofilm matrix protein TasA -

Sequence

Protein


Download         Length: 98 a.a.        Molecular weight: 10835.67 Da        Isoelectric Point: 6.2112

>NTDB_id=195185 BGM23_RS09735 WP_029726719.1 1855010..1855306(+) (comGC) [Bacillus sp. FJAT-14266]
MNEKGFTLVEMLIVLFIISILLLITIPNVTKHNQTIQKKGCEGLQNMVKAQMTAFELDHEGQTPSLADLQSEGYVKNDAV
CPNGKRIIITGGEVKVEH

Nucleotide


Download         Length: 297 bp        

>NTDB_id=195185 BGM23_RS09735 WP_029726719.1 1855010..1855306(+) (comGC) [Bacillus sp. FJAT-14266]
ATGAATGAGAAAGGATTTACACTTGTTGAAATGTTAATCGTGCTCTTTATTATTTCGATTTTGCTTTTAATTACGATACC
GAACGTCACGAAACATAACCAAACCATTCAAAAAAAGGGCTGTGAAGGCTTACAAAACATGGTTAAGGCACAAATGACTG
CATTTGAGCTTGATCATGAAGGACAAACTCCGAGCCTTGCCGATTTACAGTCAGAGGGCTATGTGAAAAACGATGCTGTC
TGTCCAAATGGTAAGCGCATTATCATCACCGGCGGAGAAGTTAAGGTTGAACATTAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-25)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGC Bacillus subtilis subsp. subtilis str. 168

98.98

100

0.99
  comGC Staphylococcus aureus MW2

41.304

93.878

0.388
  comGC Staphylococcus aureus N315

41.304

93.878

0.388
  comYC Streptococcus suis isolate S10

49.333

76.531

0.378

Multiple sequence alignment