Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | BGM23_RS01145 | Genome accession | NZ_CP017072 |
| Coordinates | 199252..199770 (+) | Length | 172 a.a. |
| NCBI ID | WP_003219228.1 | Uniprot ID | A0A063XE16 |
| Organism | Bacillus sp. FJAT-14266 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 194252..204770
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BGM23_RS01125 (BGM23_01125) | - | 195326..195532 (+) | 207 | WP_003226838.1 | DUF951 family protein | - |
| BGM23_RS01130 (BGM23_01130) | - | 195583..197586 (+) | 2004 | WP_029726086.1 | molybdopterin-dependent oxidoreductase | - |
| BGM23_RS01135 (BGM23_01135) | ychF | 197713..198813 (+) | 1101 | WP_003242727.1 | redox-regulated ATPase YchF | - |
| BGM23_RS01140 (BGM23_01140) | rpsF | 198924..199211 (+) | 288 | WP_003244064.1 | 30S ribosomal protein S6 | - |
| BGM23_RS01145 (BGM23_01145) | ssbA | 199252..199770 (+) | 519 | WP_003219228.1 | single-stranded DNA-binding protein SsbA | Machinery gene |
| BGM23_RS01150 (BGM23_01150) | rpsR | 199814..200053 (+) | 240 | WP_003219224.1 | 30S ribosomal protein S18 | - |
| BGM23_RS01155 (BGM23_01155) | xth | 200118..200876 (+) | 759 | WP_041336712.1 | exodeoxyribonuclease III | - |
| BGM23_RS01160 (BGM23_01160) | ccpB | 200936..201871 (+) | 936 | WP_041337894.1 | transcriptional regulator CcpB | - |
| BGM23_RS01165 (BGM23_01165) | - | 201927..202307 (+) | 381 | WP_015250784.1 | VOC family protein | - |
| BGM23_RS01170 (BGM23_01170) | - | 202323..202877 (+) | 555 | WP_015250785.1 | sugar O-acetyltransferase | - |
| BGM23_RS01175 (BGM23_01175) | - | 202911..204266 (-) | 1356 | WP_029318525.1 | MFS transporter | - |
Sequence
Protein
Download Length: 172 a.a. Molecular weight: 18742.31 Da Isoelectric Point: 4.7621
>NTDB_id=195153 BGM23_RS01145 WP_003219228.1 199252..199770(+) (ssbA) [Bacillus sp. FJAT-14266]
MLNRVVLVGRLTKDPELRYTPNGAAVATFTLAVNRTFTNQSGEREADFINCVTWRRQAENVANFLKKGSLAGVDGRLQTR
NYENQQGQRVFVTEVQAESVQFLEPKNGGGSGSGGYNEGNSGGGQYFGGGQNDNPFGGNQNNQRRNQGNSFNDDPFANDG
KPIDISDDDLPF
MLNRVVLVGRLTKDPELRYTPNGAAVATFTLAVNRTFTNQSGEREADFINCVTWRRQAENVANFLKKGSLAGVDGRLQTR
NYENQQGQRVFVTEVQAESVQFLEPKNGGGSGSGGYNEGNSGGGQYFGGGQNDNPFGGNQNNQRRNQGNSFNDDPFANDG
KPIDISDDDLPF
Nucleotide
Download Length: 519 bp
>NTDB_id=195153 BGM23_RS01145 WP_003219228.1 199252..199770(+) (ssbA) [Bacillus sp. FJAT-14266]
ATGCTTAACCGAGTTGTATTAGTCGGAAGACTGACAAAAGACCCAGAGCTTCGTTATACGCCAAACGGTGCGGCTGTTGC
TACGTTTACTCTTGCTGTGAATCGTACATTTACGAACCAGTCCGGAGAACGTGAGGCCGATTTCATTAATTGTGTCACTT
GGAGAAGACAAGCCGAAAACGTTGCAAACTTCTTGAAAAAAGGAAGCCTTGCAGGCGTAGATGGCCGTTTACAAACAAGA
AACTATGAAAACCAGCAAGGACAGCGTGTCTTCGTGACAGAGGTCCAAGCTGAAAGTGTTCAATTTCTTGAGCCGAAAAA
CGGCGGCGGTTCTGGTTCAGGTGGATACAACGAAGGAAACAGCGGCGGAGGCCAGTACTTTGGCGGAGGCCAAAATGATA
ATCCATTTGGGGGAAATCAAAACAACCAGAGACGCAATCAGGGGAACAGCTTTAATGATGACCCATTTGCCAACGACGGC
AAACCGATTGACATCTCGGATGATGATCTTCCATTCTAA
ATGCTTAACCGAGTTGTATTAGTCGGAAGACTGACAAAAGACCCAGAGCTTCGTTATACGCCAAACGGTGCGGCTGTTGC
TACGTTTACTCTTGCTGTGAATCGTACATTTACGAACCAGTCCGGAGAACGTGAGGCCGATTTCATTAATTGTGTCACTT
GGAGAAGACAAGCCGAAAACGTTGCAAACTTCTTGAAAAAAGGAAGCCTTGCAGGCGTAGATGGCCGTTTACAAACAAGA
AACTATGAAAACCAGCAAGGACAGCGTGTCTTCGTGACAGAGGTCCAAGCTGAAAGTGTTCAATTTCTTGAGCCGAAAAA
CGGCGGCGGTTCTGGTTCAGGTGGATACAACGAAGGAAACAGCGGCGGAGGCCAGTACTTTGGCGGAGGCCAAAATGATA
ATCCATTTGGGGGAAATCAAAACAACCAGAGACGCAATCAGGGGAACAGCTTTAATGATGACCCATTTGCCAACGACGGC
AAACCGATTGACATCTCGGATGATGATCTTCCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
58.192 |
100 |
0.599 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
64.151 |
61.628 |
0.395 |
| ssb | Glaesserella parasuis strain SC1401 |
35.519 |
100 |
0.378 |