Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | BGK56_RS11235 | Genome accession | NZ_CP017054 |
| Coordinates | 2403910..2404425 (-) | Length | 171 a.a. |
| NCBI ID | WP_004924506.1 | Uniprot ID | A0A140NIZ6 |
| Organism | Providencia stuartii strain BE2467 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2398910..2409425
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BGK56_RS11220 (BGK56_10975) | aarP | 2398916..2399323 (+) | 408 | WP_004924490.1 | HTH-type transcriptional activator AarP | - |
| BGK56_RS11225 (BGK56_10980) | - | 2399814..2401163 (-) | 1350 | WP_036941998.1 | DNA-processing protein DprA | - |
| BGK56_RS11230 (BGK56_10985) | - | 2401160..2403259 (-) | 2100 | WP_004924500.1 | RecQ family ATP-dependent DNA helicase | - |
| BGK56_RS11235 (BGK56_10990) | ssb | 2403910..2404425 (-) | 516 | WP_004924506.1 | single-stranded DNA-binding protein | Machinery gene |
| BGK56_RS11240 (BGK56_10995) | uvrA | 2404815..2407649 (+) | 2835 | WP_061064667.1 | excinuclease ABC subunit UvrA | - |
| BGK56_RS23975 | - | 2407899..2408009 (+) | 111 | WP_350572682.1 | transposase domain-containing protein | - |
| BGK56_RS11250 (BGK56_11000) | - | 2408223..2409419 (-) | 1197 | WP_014656877.1 | aromatic amino acid transaminase | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 18371.35 Da Isoelectric Point: 4.9567
>NTDB_id=194834 BGK56_RS11235 WP_004924506.1 2403910..2404425(-) (ssb) [Providencia stuartii strain BE2467]
MASRGVNKVILIGNLGQDPEIRYMPNGGAVANLTLATSESWRDKQTGEMREKTEWHRVVIFGKLAEVAGEYLKKGSQVYI
EGSLQTRKWQDQSGQDRYTTEVVVNIGGSMQMLGGRGGESSGQSQGGQSGWGQPQQPAAQQFSGGGAPARSPAPAPQSSE
PPMDFDDDIPF
MASRGVNKVILIGNLGQDPEIRYMPNGGAVANLTLATSESWRDKQTGEMREKTEWHRVVIFGKLAEVAGEYLKKGSQVYI
EGSLQTRKWQDQSGQDRYTTEVVVNIGGSMQMLGGRGGESSGQSQGGQSGWGQPQQPAAQQFSGGGAPARSPAPAPQSSE
PPMDFDDDIPF
Nucleotide
Download Length: 516 bp
>NTDB_id=194834 BGK56_RS11235 WP_004924506.1 2403910..2404425(-) (ssb) [Providencia stuartii strain BE2467]
ATGGCCAGCAGAGGCGTAAATAAAGTAATTCTTATCGGTAACTTAGGGCAAGATCCTGAAATCCGTTACATGCCTAACGG
TGGTGCTGTTGCAAACCTGACTCTGGCAACTTCTGAAAGCTGGCGCGATAAGCAAACTGGTGAAATGCGTGAGAAAACAG
AATGGCATCGTGTCGTGATTTTCGGCAAATTAGCTGAAGTTGCTGGTGAATATCTGAAAAAAGGTTCTCAAGTCTATATT
GAAGGTTCTTTGCAGACTCGCAAATGGCAAGACCAAAGTGGTCAAGACCGTTACACCACTGAAGTTGTGGTTAACATCGG
TGGCTCAATGCAAATGTTAGGCGGTCGTGGTGGCGAATCATCAGGCCAAAGCCAAGGTGGTCAAAGCGGTTGGGGTCAGC
CTCAGCAACCAGCGGCTCAGCAATTCAGTGGCGGCGGCGCCCCAGCGCGTTCACCAGCACCTGCGCCACAAAGCAGCGAA
CCACCAATGGACTTCGATGACGATATTCCGTTCTGA
ATGGCCAGCAGAGGCGTAAATAAAGTAATTCTTATCGGTAACTTAGGGCAAGATCCTGAAATCCGTTACATGCCTAACGG
TGGTGCTGTTGCAAACCTGACTCTGGCAACTTCTGAAAGCTGGCGCGATAAGCAAACTGGTGAAATGCGTGAGAAAACAG
AATGGCATCGTGTCGTGATTTTCGGCAAATTAGCTGAAGTTGCTGGTGAATATCTGAAAAAAGGTTCTCAAGTCTATATT
GAAGGTTCTTTGCAGACTCGCAAATGGCAAGACCAAAGTGGTCAAGACCGTTACACCACTGAAGTTGTGGTTAACATCGG
TGGCTCAATGCAAATGTTAGGCGGTCGTGGTGGCGAATCATCAGGCCAAAGCCAAGGTGGTCAAAGCGGTTGGGGTCAGC
CTCAGCAACCAGCGGCTCAGCAATTCAGTGGCGGCGGCGCCCCAGCGCGTTCACCAGCACCTGCGCCACAAAGCAGCGAA
CCACCAATGGACTTCGATGACGATATTCCGTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
70.33 |
100 |
0.749 |
| ssb | Glaesserella parasuis strain SC1401 |
57.065 |
100 |
0.614 |
| ssb | Neisseria gonorrhoeae MS11 |
48.603 |
100 |
0.509 |
| ssb | Neisseria meningitidis MC58 |
47.514 |
100 |
0.503 |