Detailed information NTG0194629

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: CJ14980A_RS05885
• Genome accession: NZ_CP017029
• Coordinates: 1148121..1149080 (+)
• Length: 319 a.a.
• NCBI ID: WP_057043612.1
• Uniprot ID: -
• Organism: Campylobacter jejuni subsp. jejuni strain 14980A
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1143121..1154080

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CJ14980A_RS05860 (CJ14980A_1144)	neuC	1143710..1144834 (+)	1125	WP_002868604.1	UDP-N-acetylglucosamine 2-epimerase	-
CJ14980A_RS05865 (CJ14980A_1145)	-	1144827..1145774 (+)	948	WP_042635875.1	glycosyltransferase	-
CJ14980A_RS05870 (CJ14980A_1146)	-	1145771..1146436 (+)	666	WP_002935341.1	cytidylyltransferase domain-containing protein	-
CJ14980A_RS05875 (CJ14980A_1147)	-	1146560..1147192 (+)	633	WP_042635876.1	CatB-related O-acetyltransferase	-
CJ14980A_RS05880 (CJ14980A_1148)	waaV	1147250..1148062 (-)	813	WP_002918295.1	glycosyltransferase family 2 protein	-
CJ14980A_RS05885 (CJ14980A_1149)	waaF	1148121..1149080 (+)	960	WP_057043612.1	lipopolysaccharide heptosyltransferase II	Regulator
CJ14980A_RS05890 (CJ14980A_1150)	gmhA	1149061..1149621 (-)	561	WP_041160152.1	D-sedoheptulose 7-phosphate isomerase	-
CJ14980A_RS05895 (CJ14980A_1151)	rfaE1	1149618..1151003 (-)	1386	WP_002910336.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
CJ14980A_RS05900 (CJ14980A_1152)	rfaD	1150996..1151949 (-)	954	WP_002886910.1	ADP-glyceromanno-heptose 6-epimerase	-
CJ14980A_RS05905 (CJ14980A_1153)	gmhB	1151950..1152511 (-)	562	Protein_1142	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
CJ14980A_RS05910 (CJ14980A_1154)	-	1152592..1152894 (+)	303	WP_002852762.1	c-type cytochrome	-
CJ14980A_RS05915 (CJ14980A_1155)	ccoS	1152917..1153123 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36659.20 Da
• Isoelectric Point: 10.3627

>NTDB_id=194629 CJ14980A_RS05885 WP_057043612.1 1148121..1149080(+) (waaF) [Campylobacter jejuni subsp. jejuni strain 14980A]
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDLSFT
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENALSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGSTKFTQTSPWQNQNAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPQRVIEEARNLLKNSHL

Nucleotide

• Length: 960 bp

>NTDB_id=194629 CJ14980A_RS05885 WP_057043612.1 1148121..1149080(+) (waaF) [Campylobacter jejuni subsp. jejuni strain 14980A]
ATGAAAATTTTTATACATCTTCCCACTTGGCTGGGCGATGCAGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCCCAATTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCTCGCTATAAACAAGCCCTATCTTTACGTAAAGAACTTGGTAAAATCGATCTTAGCTTTACT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACGCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAAATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCTCCACAAAATTTACCCAAACTTCACC
TTGGCAAAATCAAAACGCAAAATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTCAAAGGGTTATAGAAGAGGCTAGAAATTTACTTAAAAACTCTCATCTATGA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (95-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	94.357	100	0.944