Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   BFM96_RS05740 Genome accession   NZ_CP016953
Coordinates   1217703..1218707 (+) Length   334 a.a.
NCBI ID   WP_068991506.1    Uniprot ID   A0A917EFA3
Organism   Streptococcus himalayensis strain HTS2     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1212703..1223707
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BFM96_RS05715 sepM 1212769..1213812 (+) 1044 WP_068991494.1 SepM family pheromone-processing serine protease Regulator
  BFM96_RS05720 - 1214125..1214655 (+) 531 WP_068991496.1 YutD family protein -
  BFM96_RS05725 rlmN 1214665..1215747 (+) 1083 WP_068991499.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  BFM96_RS05730 - 1215779..1216255 (+) 477 WP_373283972.1 VanZ family protein -
  BFM96_RS05735 - 1216408..1217256 (+) 849 WP_068991504.1 DUF4300 family protein -
  BFM96_RS05740 ccpA 1217703..1218707 (+) 1005 WP_068991506.1 catabolite control protein A Regulator
  BFM96_RS05745 - 1218780..1219778 (+) 999 WP_068991508.1 glycosyltransferase -
  BFM96_RS05750 - 1219779..1221092 (+) 1314 WP_068991510.1 glycosyltransferase family 4 protein -
  BFM96_RS05760 - 1222091..1222708 (+) 618 WP_068991515.1 DUF1349 domain-containing protein -

Sequence

Protein


Download         Length: 334 a.a.        Molecular weight: 36946.06 Da        Isoelectric Point: 5.5292

>NTDB_id=194042 BFM96_RS05740 WP_068991506.1 1217703..1218707(+) (ccpA) [Streptococcus himalayensis strain HTS2]
MNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIISSYFS
TLAKGIDDIAEMYKYNIVLANSDEDDDKEVSVVNTLFSKQVDGIIFMGYHLSDKIRSEFSRSRTPVVLAGTVDIEHQLPS
VNIDYKQATIDAVSLLAKRNEKIAFVSGPLVDDINGKIRLSGYKAALKKEKLSYSEGLVFESKYSYDDGYQLAERVIASK
ATAAFVTGDELAAGLLNGLSDQGVKVPEDFEIITSDDTQVARFTRPNMTTIGQPLYDLGAISMRMLTKIMHKEELEEREV
LLAHSIVERQSTKK

Nucleotide


Download         Length: 1005 bp        

>NTDB_id=194042 BFM96_RS05740 WP_068991506.1 1217703..1218707(+) (ccpA) [Streptococcus himalayensis strain HTS2]
ATGAATACAGACGATACAGTAACGATTTACGATGTCGCCCGTGAAGCAGGAGTTTCCATGGCAACGGTCAGCCGTGTTGT
CAATGGAAATAAAAATGTGAAGGAAAACACGCGTAAGAAAGTCTTGGAAGTCATTGACCGTTTGGACTATCGTCCAAATG
CAGTAGCACGAGGCTTGGCTAGTAAGAAAACGACAACGGTCGGCGTTGTAATTCCAAACATCATTAGTAGCTATTTCTCA
ACTCTTGCAAAAGGGATTGATGATATTGCTGAAATGTATAAGTATAATATTGTCCTTGCTAATAGCGATGAGGATGATGA
TAAGGAAGTTTCTGTGGTCAACACCCTCTTTTCAAAACAGGTGGATGGTATCATCTTTATGGGGTATCATTTAAGTGACA
AGATTCGGTCTGAATTTTCCCGTTCACGCACGCCTGTTGTTCTTGCAGGGACAGTGGATATTGAGCACCAATTGCCAAGT
GTCAATATTGACTATAAGCAAGCAACGATTGACGCCGTTAGTCTTTTAGCGAAGCGTAATGAAAAGATTGCCTTTGTGTC
TGGTCCTTTGGTGGATGATATCAATGGCAAGATTCGTTTATCAGGCTATAAAGCAGCTCTGAAAAAGGAAAAATTATCGT
ATAGTGAAGGTTTGGTATTTGAGTCTAAATACAGCTATGATGATGGGTACCAGTTGGCGGAGCGCGTGATTGCCTCAAAA
GCAACTGCAGCCTTTGTTACAGGTGATGAGCTCGCTGCAGGCTTGTTAAATGGATTGTCAGATCAAGGCGTGAAGGTTCC
AGAAGACTTTGAAATCATTACGAGCGACGATACTCAAGTGGCACGTTTTACACGTCCAAATATGACTACGATTGGTCAGC
CCTTGTATGATTTAGGGGCCATCAGTATGCGTATGCTGACTAAAATCATGCACAAGGAAGAGTTGGAAGAACGAGAAGTC
CTCCTAGCTCACAGTATTGTGGAGCGTCAGTCTACAAAAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, lacI family (LacI)

(8-53)

Periplasmic binding protein-like domain (Peripla_BP_3)

(175-332)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

89.82

100

0.898
  ccpA Streptococcus pneumoniae D39

87.126

100

0.871
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

55.891

99.102

0.554

Multiple sequence alignment