Detailed information    

insolico Bioinformatically predicted

Overview

Name   sepM   Type   Regulator
Locus tag   BFM96_RS05715 Genome accession   NZ_CP016953
Coordinates   1212769..1213812 (+) Length   347 a.a.
NCBI ID   WP_068991494.1    Uniprot ID   A0A917A9K2
Organism   Streptococcus himalayensis strain HTS2     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context

Location: 1207769..1218812
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BFM96_RS05700 asnA 1210508..1211500 (+) 993 WP_068991486.1 aspartate--ammonia ligase -
  BFM96_RS05705 rsmD 1211768..1212307 (+) 540 WP_068991489.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  BFM96_RS05710 coaD 1212297..1212791 (+) 495 WP_068991490.1 pantetheine-phosphate adenylyltransferase -
  BFM96_RS05715 sepM 1212769..1213812 (+) 1044 WP_068991494.1 SepM family pheromone-processing serine protease Regulator
  BFM96_RS05720 - 1214125..1214655 (+) 531 WP_068991496.1 YutD family protein -
  BFM96_RS05725 rlmN 1214665..1215747 (+) 1083 WP_068991499.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  BFM96_RS05730 - 1215779..1216255 (+) 477 WP_373283972.1 VanZ family protein -
  BFM96_RS05735 - 1216408..1217256 (+) 849 WP_068991504.1 DUF4300 family protein -
  BFM96_RS05740 ccpA 1217703..1218707 (+) 1005 WP_068991506.1 catabolite control protein A Regulator

Sequence

Protein


Download         Length: 347 a.a.        Molecular weight: 37609.99 Da        Isoelectric Point: 5.7642

>NTDB_id=194041 BFM96_RS05715 WP_068991494.1 1212769..1213812(+) (sepM) [Streptococcus himalayensis strain HTS2]
MNKKKSNKWLLVGLTSFLCLVLAFIVPLPYYIEVPGGSEDIREVLKVDGKEDTAAGSYHFVTVGIQHATFAHLVYAWLTP
FTDIHTAEEVTGGSSDSEFLRINQFYMETSQNMATYQGLKMAGKEIEMKYLGVYVLQVAKDSTFKGILNIADTVTGVNDK
TFQSSKELIDYVGSQKIGDKVKVTYEEDGQVKSAEGKIIKLENGKNGIGISLIDRTEATSATPIAFSTEGIGGPSAGLMF
SLAIYTQLADPDLRDGRIIAGTGTIDKDGKVGDIGGIDKKVVAAAQKGASVFFAPDNPVSEEAKKADPHAKNNYEVAKEA
VKTIKTDMKIVPVKTLKDAIDYLKKTE

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=194041 BFM96_RS05715 WP_068991494.1 1212769..1213812(+) (sepM) [Streptococcus himalayensis strain HTS2]
ATGAACAAAAAGAAGAGCAATAAATGGCTCCTAGTGGGGCTTACTAGCTTTCTATGTCTAGTGTTAGCTTTTATTGTCCC
TTTGCCTTATTATATTGAAGTTCCGGGTGGGTCAGAGGACATTCGAGAAGTCTTAAAGGTCGATGGGAAAGAAGATACGG
CGGCAGGTTCCTACCATTTTGTAACGGTAGGAATTCAGCATGCGACCTTTGCTCATTTGGTCTATGCTTGGCTGACTCCC
TTTACAGATATCCACACAGCCGAGGAAGTAACAGGTGGGTCTTCGGATAGCGAATTTTTAAGAATCAATCAATTTTATAT
GGAAACATCTCAAAATATGGCTACATACCAAGGATTAAAAATGGCTGGTAAAGAAATTGAGATGAAATATCTAGGGGTCT
ATGTCTTACAAGTGGCGAAAGATTCGACTTTTAAAGGAATTTTAAATATCGCAGATACTGTGACAGGAGTCAATGATAAG
ACCTTCCAAAGCTCAAAAGAGTTGATTGATTATGTAGGTTCTCAAAAAATTGGAGATAAAGTCAAGGTGACCTACGAAGA
AGATGGACAGGTAAAATCAGCAGAAGGCAAGATTATCAAGTTAGAAAATGGGAAAAATGGCATTGGAATTAGCTTGATTG
ACCGAACGGAAGCGACAAGTGCCACGCCGATTGCCTTTTCAACAGAAGGAATTGGAGGTCCTAGTGCTGGACTGATGTTT
AGTTTGGCAATCTATACGCAGTTGGCAGATCCAGACTTGCGAGATGGACGGATTATCGCAGGGACAGGGACGATTGATAA
AGATGGCAAGGTCGGAGATATTGGCGGCATTGATAAAAAGGTCGTTGCAGCTGCCCAAAAAGGAGCGAGCGTTTTCTTTG
CCCCAGACAATCCTGTCAGCGAGGAGGCAAAAAAAGCGGATCCACATGCCAAAAACAACTATGAAGTCGCGAAAGAAGCT
GTGAAAACCATTAAAACAGACATGAAAATTGTACCTGTCAAGACGTTAAAAGACGCAATTGATTACTTAAAAAAGACTGA
GTAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_2)

(128-195)

Lon protease (S16) C-terminal proteolytic domain (Lon_C)

(233-299)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

59.42

99.424

0.591

Multiple sequence alignment