Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   BFM96_RS02965 Genome accession   NZ_CP016953
Coordinates   597144..597911 (-) Length   255 a.a.
NCBI ID   WP_068990086.1    Uniprot ID   A0A917A411
Organism   Streptococcus himalayensis strain HTS2     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 592144..602911
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BFM96_RS02945 - 593295..593666 (-) 372 WP_068990076.1 helix-turn-helix domain-containing protein -
  BFM96_RS02950 - 594071..594262 (-) 192 WP_068990079.1 DUF951 domain-containing protein -
  BFM96_RS02955 dnaN 594262..595398 (-) 1137 WP_068990081.1 DNA polymerase III subunit beta -
  BFM96_RS02960 dnaA 595555..596916 (-) 1362 WP_068990083.1 chromosomal replication initiator protein DnaA -
  BFM96_RS02965 spo0J 597144..597911 (-) 768 WP_068990086.1 ParB/RepB/Spo0J family partition protein Regulator
  BFM96_RS02970 htrA 597974..599149 (-) 1176 WP_068990089.1 S1C family serine protease Regulator
  BFM96_RS02975 rlmH 599354..599833 (+) 480 WP_068990092.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  BFM96_RS10785 - 600115..600249 (+) 135 WP_083201733.1 ComC/BlpC family leader-containing pheromone/bacteriocin -
  BFM96_RS02985 comD/comD2 600265..601587 (+) 1323 WP_068990095.1 GHKL domain-containing protein Regulator
  BFM96_RS02990 comE/comE2 601584..602327 (+) 744 WP_068990101.1 competence system response regulator transcription factor ComE Regulator
  BFM96_RS11430 - 602555..602680 (+) 126 WP_262981929.1 hypothetical protein -

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29578.91 Da        Isoelectric Point: 9.4318

>NTDB_id=194001 BFM96_RS02965 WP_068990086.1 597144..597911(-) (spo0J) [Streptococcus himalayensis strain HTS2]
MEHYQQIPLSDIQVNPYQPRKEFDPKKLQELAQSIRENGIIQPIIVRKSNIIGYELLAGERRFRAAKLAGLTKISAIIKE
LSDDDMIQHAIIENLQRENLNPIEEAESYQHLIDRGLTHQEIAESIGKSRPYISNILRLLALPDDIQKSVKDGRLSQAHA
RVLIPLKKEEQEHWFQIIEKEAPSVRWLEKAIQTSTLNKKTNQKSQFIQAEEEKLRKKLGVEVQIKIRSQKEQNGTLSIS
FSNLEEYQRIINSFK

Nucleotide


Download         Length: 768 bp        

>NTDB_id=194001 BFM96_RS02965 WP_068990086.1 597144..597911(-) (spo0J) [Streptococcus himalayensis strain HTS2]
ATGGAACATTATCAACAAATCCCGTTAAGCGATATTCAAGTCAATCCTTATCAACCTCGTAAAGAATTTGACCCTAAAAA
ATTACAAGAATTAGCCCAATCTATCCGAGAAAATGGCATTATCCAACCAATTATTGTTCGAAAGTCTAATATCATCGGCT
ATGAATTACTAGCAGGAGAAAGACGATTTCGAGCAGCCAAACTGGCTGGATTGACAAAAATTTCAGCTATTATCAAGGAG
TTGAGCGATGATGACATGATCCAGCATGCAATCATTGAAAATTTACAAAGAGAAAATCTCAATCCTATCGAAGAAGCCGA
GTCCTATCAACATCTCATTGACAGAGGATTGACACATCAAGAAATTGCAGAAAGCATAGGAAAGTCTCGTCCTTATATTA
GCAATATTCTTCGTTTACTGGCCCTACCTGATGACATTCAAAAATCCGTTAAAGATGGACGGTTATCCCAAGCACACGCG
CGTGTCTTAATTCCCTTAAAAAAAGAGGAACAGGAACACTGGTTTCAAATTATCGAAAAAGAAGCCCCTTCTGTCAGATG
GCTAGAGAAGGCTATCCAGACCTCAACATTAAACAAGAAGACCAATCAAAAATCTCAATTTATCCAAGCAGAGGAAGAGA
AACTTCGGAAAAAATTGGGGGTCGAGGTTCAGATTAAGATTCGTAGCCAAAAGGAGCAAAATGGAACCCTCTCGATTTCA
TTTTCAAATCTTGAAGAATATCAAAGAATTATTAACAGCTTCAAATAA

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(145-193)

ParB/Sulfiredoxin domain (ParB_N)

(6-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

53.252

96.471

0.514

Multiple sequence alignment