Detailed information NTG0193904

Bioinformatically predicted

Overview

• Name: ruvB
• Type: Machinery gene
• Locus tag: CCD85_RS04740
• Genome accession: NZ_CP021519
• Coordinates: 787932..788963 (+)
• Length: 343 a.a.
• NCBI ID: WP_002220958.1
• Uniprot ID: Q9JZ86
• Organism: Neisseria meningitidis strain 11-14
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 782932..793963

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CCD85_RS04720 (CCD85_04735)	-	783842..784216 (-)	375	WP_002229491.1	arsenate reductase	-
CCD85_RS04725 (CCD85_04740)	-	784366..785994 (+)	1629	WP_002260424.1	ABC-F family ATPase	-
CCD85_RS04730 (CCD85_04745)	-	786066..787319 (+)	1254	WP_002220959.1	multifunctional CCA addition/repair protein	-
CCD85_RS04735 (CCD85_04750)	-	787542..787850 (+)	309	WP_002217140.1	hypothetical protein	-
CCD85_RS04740 (CCD85_04755)	ruvB	787932..788963 (+)	1032	WP_002220958.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
CCD85_RS04745 (CCD85_04760)	rpe	788986..789714 (-)	729	WP_002229501.1	ribulose-phosphate 3-epimerase	-
CCD85_RS04750 (CCD85_04765)	-	790025..790459 (+)	435	WP_002229506.1	Spy/CpxP family protein refolding chaperone	-
CCD85_RS04755 (CCD85_04770)	-	790472..791335 (-)	864	WP_002229505.1	ATP-binding protein	-
CCD85_RS12395	-	791343..791960 (-)	618	WP_002259912.1	riboflavin synthase	-
CCD85_RS12400	-	792123..792737 (-)	615	WP_050542568.1	molybdenum cofactor guanylyltransferase	-

Sequence

Protein

• Length: 343 a.a.
• Molecular weight: 37660.13 Da
• Isoelectric Point: 5.0462

>NTDB_id=193904 CCD85_RS04740 WP_002220958.1 787932..788963(+) (ruvB) [Neisseria meningitidis strain 11-14]
MLQTDNLTAAQPQRIVAAQTASAQEELLERALRPKTLDDYIGQDKAKEQLAIFIQAAKKRGEALDHVLLFGPPGLGKTTL
AHIIAKELGVNLRQTSGPVLERAGDLAALLTNLDPHDVLFIDEIHRLSPVVEEILYPALEDYRLDIMIGEGPAARSVKID
LPPFTLIGATTRAGMLTNPLRDRFGIVSRLEFYENRDLTTIVSRSAQLLQLDMSEEGAEEIAKRSRGTPRIANRLLRRVR
DFADVKNNGTIDGGIADAALSMLDVDAQGLDVMDRKFLEAVLHKFGGGPVGLDNVAAAIGESTDTIEDVIEPYLIQQGFL
QRTPRGRMATERAYLHFGLPVEK

Nucleotide

• Length: 1032 bp

>NTDB_id=193904 CCD85_RS04740 WP_002220958.1 787932..788963(+) (ruvB) [Neisseria meningitidis strain 11-14]
ATGCTGCAAACCGACAACCTGACCGCCGCGCAACCGCAACGCATCGTTGCCGCCCAAACCGCCTCCGCACAGGAAGAACT
GCTCGAACGCGCCCTCCGCCCCAAAACGCTGGACGACTACATCGGGCAAGACAAAGCCAAAGAACAGCTTGCCATTTTCA
TCCAAGCCGCCAAAAAACGCGGCGAAGCACTCGACCACGTTTTGCTCTTCGGCCCGCCCGGACTGGGCAAAACCACACTG
GCGCACATCATCGCCAAAGAATTGGGCGTAAATTTGCGCCAAACCAGCGGCCCCGTCCTCGAACGCGCAGGCGACCTCGC
CGCCCTTTTGACCAACCTTGATCCGCACGATGTATTGTTCATCGACGAAATCCACCGCCTCAGCCCTGTTGTCGAAGAAA
TCCTCTATCCCGCGCTCGAAGACTACCGGCTCGACATTATGATAGGCGAAGGACCCGCCGCCCGTTCCGTCAAAATCGAC
CTGCCGCCCTTCACGCTCATCGGCGCGACCACCCGCGCCGGTATGCTGACCAATCCGTTGCGCGACCGCTTCGGCATCGT
CTCCCGCCTTGAGTTTTACGAAAACCGAGACCTTACCACCATCGTCAGCCGTTCGGCACAACTGTTGCAGCTCGATATGT
CCGAAGAAGGCGCGGAAGAAATCGCCAAACGCAGCCGCGGTACGCCGCGCATCGCCAACCGCCTGTTGCGACGCGTGCGC
GATTTCGCCGACGTGAAAAACAACGGCACAATCGACGGCGGCATCGCCGATGCCGCTTTAAGTATGCTGGACGTGGACGC
GCAGGGGCTGGACGTGATGGACAGGAAATTTCTCGAAGCCGTTTTGCACAAATTCGGCGGCGGCCCGGTCGGTTTGGACA
ATGTTGCCGCCGCCATCGGCGAATCTACAGACACCATCGAAGACGTTATCGAACCCTACCTTATCCAACAAGGCTTCCTG
CAACGCACCCCGCGCGGCAGGATGGCGACCGAACGCGCCTACCTGCATTTCGGGCTGCCCGTCGAAAAATAA

Domains

Predicted by InterProScan.

• RuvB C-terminal winged helix domain (WHD_RuvB) (268-337)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (32-190)

• RuvB AAA lid domain (AAA_lid_4) (193-266)

3D structure

• AlphaFold DB: Q9JZ86

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvB	Streptococcus pneumoniae TIGR4	63.376	91.545	0.58
ruvB	Streptococcus pneumoniae R6	63.376	91.545	0.58
ruvB	Streptococcus pneumoniae D39	63.376	91.545	0.58
ruvB	Bacillus subtilis subsp. subtilis str. 168	60.55	95.335	0.577
ruvB	Helicobacter pylori 26695	57.508	91.254	0.525
ruvB	Synechocystis sp. PCC 6803	54.573	95.627	0.522