Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   BARD7_RS13810 Genome accession   NZ_CP016913
Coordinates   2795295..2797601 (-) Length   768 a.a.
NCBI ID   WP_065982199.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain RD7-7     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 2790295..2802601
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BARD7_RS13770 (BARD7_02820) - 2790755..2791186 (+) 432 WP_045509497.1 Na(+)/H(+) antiporter subunit B -
  BARD7_RS13775 (BARD7_02821) - 2791186..2791527 (+) 342 WP_013353388.1 Na(+)/H(+) antiporter subunit C -
  BARD7_RS13780 (BARD7_02822) - 2791520..2793001 (+) 1482 WP_065982195.1 Na+/H+ antiporter subunit D -
  BARD7_RS13785 (BARD7_02823) - 2793007..2793483 (+) 477 WP_065982196.1 Na+/H+ antiporter subunit E -
  BARD7_RS13790 (BARD7_02824) - 2793483..2793767 (+) 285 WP_045509491.1 Na(+)/H(+) antiporter subunit F1 -
  BARD7_RS13795 (BARD7_02825) mnhG 2793751..2794125 (+) 375 WP_065982197.1 monovalent cation/H(+) antiporter subunit G -
  BARD7_RS13800 (BARD7_02826) - 2794165..2794548 (-) 384 WP_065982198.1 hotdog fold thioesterase -
  BARD7_RS13805 (BARD7_02827) comA 2794570..2795214 (-) 645 WP_014472195.1 response regulator transcription factor Regulator
  BARD7_RS13810 (BARD7_02828) comP 2795295..2797601 (-) 2307 WP_065982199.1 sensor histidine kinase Regulator
  BARD7_RS13815 (BARD7_02829) - 2797620..2797799 (-) 180 WP_269465882.1 competence pheromone ComX -
  BARD7_RS13820 (BARD7_02830) comQ 2797803..2798735 (-) 933 WP_269465883.1 class 1 isoprenoid biosynthesis enzyme Regulator
  BARD7_RS13825 (BARD7_02831) degQ 2798866..2799006 (-) 141 WP_013353398.1 degradation enzyme regulation protein DegQ Regulator
  BARD7_RS13830 (BARD7_02832) - 2799471..2799812 (+) 342 WP_065982200.1 hypothetical protein -
  BARD7_RS13835 (BARD7_02833) - 2799819..2801042 (-) 1224 WP_065982201.1 EAL and HDOD domain-containing protein -

Sequence


Protein


Download         Length: 768 a.a.        Molecular weight: 89083.41 Da        Isoelectric Point: 8.5941

>NTDB_id=193649 BARD7_RS13810 WP_065982199.1 2795295..2797601(-) (comP) [Bacillus amyloliquefaciens strain RD7-7]
MKNFIKQFTISVIILSIVYVCYISYININGIIIGTKVIENKNKQFQVIEMSETSYGKFVGLKTGDIILRINKEKPSAKFL
KGDNLSHIKSLDVSRNGKQIHLDDFDIVNLDKSYSFFVFVLPLVFYFLSIVCIFYILKVNQTRKSFAGYILILFLLDISI
AYISAGGPFRGHSFNRYVNLFTFIASPIFYLQFIQQYFEELGKKFASRLINILYIFPVFNVIMEFFRKKLPFDIITNLNL
ISFFLVTLSGFVLVFYHLFKYKYSEHAYILKVLILTNTLSFAPFLLFYVVPNILTGDYIFPALASASLLVLIPFGLVYQF
VANKIFDIEFILGRMRYYTLLAVIPTLVIVGVLSVWDGSNELQMNPIRQTVFIFIIMFAVFYFKEIIDFKFRLKRFSEKH
NYQDSIFKYTQFIRSITSLKQMFKELKKTILDVLLVSKAYVFEVTSEGDILFHDKKDNEPDWEMYSKEFRKVTTEIGKII
ELNRGFLIKIGERGGSSYVLLCLSNINTPRLTRDEISWLKTLSFYTSVSMENVIQIEELMNHLQDLKQQGSNPVWLKKLM
FTIEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCHIEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYDL
GLVKAVSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLISIQNKVILHYEDDGV
GCNQEEGGGQAMSMGLSGIKERVRALDGRMKIDTSEGNGFKADIEMEL

Nucleotide


Download         Length: 2307 bp        

>NTDB_id=193649 BARD7_RS13810 WP_065982199.1 2795295..2797601(-) (comP) [Bacillus amyloliquefaciens strain RD7-7]
GTGAAAAACTTTATTAAACAATTCACTATTTCAGTCATTATCTTAAGCATTGTTTATGTTTGTTATATTTCTTATATAAA
CATAAATGGGATTATAATCGGAACAAAAGTTATTGAAAATAAAAACAAACAATTCCAAGTAATAGAGATGTCAGAAACTT
CTTACGGGAAATTCGTAGGTTTAAAAACAGGTGACATCATTTTAAGAATCAACAAAGAAAAACCTTCTGCTAAATTTTTA
AAAGGAGATAATCTTAGTCATATCAAAAGTTTAGATGTGAGCAGAAATGGAAAGCAAATTCATTTAGATGATTTTGATAT
TGTCAATTTAGACAAATCCTATAGCTTTTTTGTATTCGTTCTTCCGCTAGTGTTTTATTTTTTAAGTATAGTATGTATAT
TTTACATTCTAAAGGTGAATCAAACAAGAAAATCGTTTGCGGGATACATTTTAATTTTGTTCTTGTTAGATATTTCAATT
GCTTATATAAGCGCAGGAGGGCCATTTAGAGGACATTCGTTTAACAGATATGTCAATTTATTCACATTTATAGCTTCTCC
TATATTTTATCTTCAGTTCATACAACAATATTTTGAGGAATTAGGAAAGAAGTTTGCAAGTCGTCTAATCAATATCTTAT
ATATATTCCCAGTTTTTAATGTTATTATGGAGTTCTTTCGTAAGAAATTACCTTTTGACATTATAACAAACCTTAATCTT
ATCTCGTTTTTTCTCGTTACTCTTTCAGGTTTTGTTCTCGTATTCTATCACTTATTTAAATATAAATATTCAGAGCATGC
TTATATTTTGAAAGTTTTAATTCTGACAAATACACTTTCTTTTGCTCCATTTTTACTTTTTTACGTCGTACCTAATATTT
TAACTGGTGATTATATATTTCCAGCACTGGCATCAGCCTCATTACTTGTCCTTATTCCATTTGGATTAGTATATCAGTTT
GTTGCAAATAAAATATTTGATATAGAATTTATATTAGGAAGAATGAGGTATTATACTTTACTGGCTGTAATCCCAACGCT
AGTTATTGTCGGAGTTTTATCGGTCTGGGATGGATCAAATGAGCTTCAAATGAATCCTATTAGACAAACTGTTTTCATCT
TTATCATAATGTTTGCTGTATTTTATTTTAAAGAAATAATAGATTTTAAATTTCGTTTAAAACGCTTTTCAGAAAAGCAT
AATTATCAAGACAGCATTTTTAAATATACTCAGTTTATCAGGAGTATAACATCTTTAAAACAAATGTTTAAAGAATTAAA
AAAGACAATTTTGGATGTTCTTCTTGTCAGTAAAGCTTATGTCTTTGAAGTTACCTCTGAGGGTGACATTTTATTTCATG
ATAAAAAGGATAACGAACCTGACTGGGAAATGTATTCAAAAGAATTCAGGAAAGTTACTACAGAGATTGGGAAAATCATT
GAGCTAAACCGCGGTTTCTTAATCAAAATAGGAGAACGCGGGGGAAGTTCTTATGTTTTGCTTTGTTTGTCCAATATTAA
TACACCGAGACTGACTAGAGATGAGATTTCATGGCTGAAAACATTGTCTTTCTATACGAGTGTCTCTATGGAAAATGTGA
TACAGATCGAAGAACTCATGAACCATTTACAAGACCTAAAACAACAAGGCTCAAACCCTGTCTGGCTCAAAAAGCTGATG
TTTACGATTGAGGAAAAGCAGCGGTCGGATTTGGCGCGTGATCTGCATGATTCTGTGCTGCAGGATTTGATTTCTTTGAA
ACGCCAGTGTGAGCTGTTTCTGGCCGATTTTAAGAAAGAAGAGCCTTGTCACATAGAGGTGCAGGACAAGCTTCATCAGA
TGAATGAGCAGATGTCGGATGTGATTTTGATGACCCGGGAGACGTGCCATGAGCTTCGGCCTCAGCTGCTGTATGATTTG
GGTCTGGTGAAGGCGGTATCCAAGCTTGCCGCTCAGCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGGCCG
GTTTACGGCGGCGCTGGATTTGGATACGCAGCTGAATTTGTACCGCATCATTCAGGAATTTCTTTCGAATGCCATGAAGC
ATTCACAGGCCAATGAGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGATGACGGGGTC
GGATGCAATCAGGAAGAAGGCGGCGGACAGGCGATGAGCATGGGGCTTTCGGGTATTAAGGAGCGCGTTCGGGCGCTTGA
CGGCCGGATGAAAATCGACACAAGTGAAGGAAATGGTTTTAAAGCGGATATTGAAATGGAATTGTAA

Domains


Predicted by InterproScan.

(568-637)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

75.097

100

0.754


Multiple sequence alignment