Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | BEN76_RS12115 | Genome accession | NZ_CP016896 |
| Coordinates | 2552381..2552953 (-) | Length | 190 a.a. |
| NCBI ID | WP_076033164.1 | Uniprot ID | - |
| Organism | Acinetobacter soli strain GFJ2 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2547381..2557953
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BEN76_RS12100 (BEN76_12100) | gabT | 2547472..2548767 (-) | 1296 | WP_004944850.1 | 4-aminobutyrate--2-oxoglutarate transaminase | - |
| BEN76_RS12105 (BEN76_12105) | - | 2548919..2550418 (+) | 1500 | WP_048765311.1 | PLP-dependent aminotransferase family protein | - |
| BEN76_RS12110 (BEN76_12110) | - | 2550488..2551927 (-) | 1440 | WP_004934048.1 | amino acid permease | - |
| BEN76_RS12115 (BEN76_12115) | ssb | 2552381..2552953 (-) | 573 | WP_076033164.1 | single-stranded DNA-binding protein | Machinery gene |
| BEN76_RS12120 (BEN76_12120) | - | 2553005..2554369 (-) | 1365 | WP_076033165.1 | MFS transporter | - |
| BEN76_RS12125 (BEN76_12125) | - | 2554510..2555592 (-) | 1083 | WP_076033166.1 | DUF475 domain-containing protein | - |
| BEN76_RS12130 (BEN76_12130) | tenA | 2555794..2556465 (+) | 672 | WP_076033167.1 | thiaminase II | - |
| BEN76_RS12135 (BEN76_12135) | - | 2556569..2556910 (-) | 342 | WP_055415506.1 | GlpM family protein | - |
| BEN76_RS12140 (BEN76_12140) | - | 2556988..2557341 (-) | 354 | WP_076033168.1 | DUF1304 domain-containing protein | - |
Sequence
Protein
Download Length: 190 a.a. Molecular weight: 20902.67 Da Isoelectric Point: 7.0146
>NTDB_id=193536 BEN76_RS12115 WP_076033164.1 2552381..2552953(-) (ssb) [Acinetobacter soli strain GFJ2]
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSESWTDKSTGERKEQTEWHRIVLNNRLGEIAQQYLRKGSKVYIEG
SLRTRQWTDQNGQERYTTEIRGDQMQMLDTRSQGEQPMGGGQDYNQPRFNNNAPQNTGYNNQGGGYNNKNNAGANQGGGY
GNNAAGNQGGYAPKAPQQPAPADLDDDLPF
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSESWTDKSTGERKEQTEWHRIVLNNRLGEIAQQYLRKGSKVYIEG
SLRTRQWTDQNGQERYTTEIRGDQMQMLDTRSQGEQPMGGGQDYNQPRFNNNAPQNTGYNNQGGGYNNKNNAGANQGGGY
GNNAAGNQGGYAPKAPQQPAPADLDDDLPF
Nucleotide
Download Length: 573 bp
>NTDB_id=193536 BEN76_RS12115 WP_076033164.1 2552381..2552953(-) (ssb) [Acinetobacter soli strain GFJ2]
ATGCGTGGTGTAAATAAAGTAATTTTAGTTGGGACCTTGGGCCGTGACCCGGAAACCAAAACGTTTCCAAATGGCGGGTC
ATTGACTCAATTTTCGATTGCAACCAGCGAATCGTGGACAGATAAAAGTACGGGTGAGCGTAAAGAGCAAACCGAATGGC
ATCGTATTGTGTTGAATAACCGTTTAGGTGAAATTGCACAGCAATACCTGCGTAAAGGTTCAAAAGTGTACATTGAGGGT
TCATTGCGTACCCGTCAGTGGACAGATCAAAACGGTCAAGAGCGTTATACCACCGAAATTCGTGGCGACCAGATGCAAAT
GCTCGATACACGTAGCCAAGGCGAGCAGCCTATGGGTGGCGGTCAGGACTACAACCAGCCACGCTTCAATAACAATGCAC
CGCAAAACACCGGCTACAACAACCAAGGCGGTGGTTATAACAACAAAAACAACGCTGGTGCCAACCAAGGTGGCGGTTAT
GGCAATAATGCTGCGGGCAATCAAGGCGGTTATGCACCTAAAGCCCCACAGCAACCTGCTCCAGCAGATCTAGACGACGA
TTTACCGTTCTAA
ATGCGTGGTGTAAATAAAGTAATTTTAGTTGGGACCTTGGGCCGTGACCCGGAAACCAAAACGTTTCCAAATGGCGGGTC
ATTGACTCAATTTTCGATTGCAACCAGCGAATCGTGGACAGATAAAAGTACGGGTGAGCGTAAAGAGCAAACCGAATGGC
ATCGTATTGTGTTGAATAACCGTTTAGGTGAAATTGCACAGCAATACCTGCGTAAAGGTTCAAAAGTGTACATTGAGGGT
TCATTGCGTACCCGTCAGTGGACAGATCAAAACGGTCAAGAGCGTTATACCACCGAAATTCGTGGCGACCAGATGCAAAT
GCTCGATACACGTAGCCAAGGCGAGCAGCCTATGGGTGGCGGTCAGGACTACAACCAGCCACGCTTCAATAACAATGCAC
CGCAAAACACCGGCTACAACAACCAAGGCGGTGGTTATAACAACAAAAACAACGCTGGTGCCAACCAAGGTGGCGGTTAT
GGCAATAATGCTGCGGGCAATCAAGGCGGTTATGCACCTAAAGCCCCACAGCAACCTGCTCCAGCAGATCTAGACGACGA
TTTACCGTTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Glaesserella parasuis strain SC1401 |
54.737 |
100 |
0.547 |
| ssb | Vibrio cholerae strain A1552 |
43.434 |
100 |
0.453 |
| ssb | Neisseria meningitidis MC58 |
39.896 |
100 |
0.405 |
| ssb | Neisseria gonorrhoeae MS11 |
39.896 |
100 |
0.405 |