Detailed information NTG0193503

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: BFG52_RS14530
• Genome accession: NZ_CP016895
• Coordinates: 3276941..3278002 (-)
• Length: 353 a.a.
• NCBI ID: WP_067557801.1
• Uniprot ID: -
• Organism: Acinetobacter larvae strain BRTC-1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3271941..3283002

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BFG52_RS14505 (BFG52_14505)	aroK	3271946..3272500 (-)	555	WP_067557787.1	shikimate kinase AroK	-
BFG52_RS14510 (BFG52_14510)	-	3272537..3274480 (-)	1944	WP_067557790.1	type IV pilus secretin PilQ	-
BFG52_RS14515 (BFG52_14515)	-	3274952..3275605 (-)	654	WP_067557793.1	pilus assembly protein PilP	-
BFG52_RS14520 (BFG52_14520)	-	3275602..3276333 (-)	732	WP_067557795.1	type 4a pilus biogenesis protein PilO	-
BFG52_RS14525 (BFG52_14525)	-	3276333..3276944 (-)	612	WP_067557798.1	PilN domain-containing protein	-
BFG52_RS14530 (BFG52_14530)	comM	3276941..3278002 (-)	1062	WP_067557801.1	pilus assembly protein PilM	Machinery gene
BFG52_RS14535 (BFG52_14535)	ponA	3278161..3280698 (+)	2538	WP_067557804.1	penicillin-binding protein PBP1a	-
BFG52_RS14540 (BFG52_14540)	-	3280846..3281664 (-)	819	WP_067557807.1	putative RNA methyltransferase	-
BFG52_RS14545 (BFG52_14545)	mraY	3281753..3282871 (-)	1119	WP_067557810.1	phospho-N-acetylmuramoyl-pentapeptide- transferase	-

Sequence

Protein

• Length: 353 a.a.
• Molecular weight: 39178.78 Da
• Isoelectric Point: 5.8567

>NTDB_id=193503 BFG52_RS14530 WP_067557801.1 3276941..3278002(-) (comM) [Acinetobacter larvae strain BRTC-1]
MFKVFQKQRHHLIGVDISSTSVKVLELSIKNGRYWVESYGLSPLKNCHDADKNSDDPDVIANALVDAIHIANPYAHQAAI
AIPSRMAIEKIIEMDAELDDDSREMQIRLQADQHIPFPLEEVSLDFEVLGPSSHAADQVNVLLVAARTEHIQTRVKALEL
AGLSVTIADVERYAIERASEVFSDLLPIGTRLVAILDIGHTLTTLSVLEQRKIIYTREHVFGGQQLTQQIQDYYGLSFEE
AGRAKKTKLLPDDYETQVLTPFLENVVQHVIKSLQFFYSSTAYHALDHVLLAGGNANIDGLAARLQRKIGCPVSIANPFL
HMGLSPQIDQKKLKNDAPSLLTACGLALRSFDP

Nucleotide

• Length: 1062 bp

>NTDB_id=193503 BFG52_RS14530 WP_067557801.1 3276941..3278002(-) (comM) [Acinetobacter larvae strain BRTC-1]
GTGTTCAAAGTTTTTCAAAAACAGCGTCACCATCTGATCGGTGTCGATATTAGTTCGACTTCTGTGAAAGTCCTAGAGCT
TTCTATAAAAAATGGTCGCTACTGGGTAGAAAGCTATGGTTTAAGCCCTTTGAAAAATTGCCATGATGCCGACAAAAATA
GTGATGATCCCGATGTGATCGCCAATGCCTTGGTCGATGCAATTCATATTGCCAATCCCTACGCACATCAGGCGGCTATT
GCGATTCCGAGTCGGATGGCAATCGAAAAAATCATTGAAATGGATGCCGAACTCGATGATGACAGCCGTGAAATGCAAAT
TCGTCTCCAAGCAGATCAACACATTCCTTTTCCATTAGAAGAAGTGAGTTTAGATTTTGAAGTACTAGGACCCAGTTCAC
ATGCTGCCGATCAAGTGAACGTGCTTCTTGTTGCGGCACGGACTGAACATATTCAAACACGTGTTAAAGCCTTGGAATTG
GCTGGATTAAGCGTTACTATCGCTGACGTAGAGCGTTATGCGATTGAGCGTGCGTCAGAAGTCTTCTCCGATTTATTACC
CATCGGGACACGGCTGGTGGCAATTCTAGATATTGGACATACCCTGACCACTTTGTCGGTCTTGGAACAGCGCAAAATTA
TTTATACGCGAGAACATGTTTTTGGTGGGCAACAGCTCACACAACAGATTCAGGACTATTATGGATTGTCCTTTGAAGAA
GCAGGACGTGCTAAAAAGACTAAACTTTTACCTGATGATTATGAAACACAAGTGCTCACACCTTTTTTAGAAAATGTGGT
GCAACACGTCATCAAGTCCTTACAGTTTTTTTATTCGAGTACGGCGTATCATGCACTGGATCATGTTTTGTTGGCGGGTG
GCAATGCCAATATTGACGGGCTGGCTGCACGCTTACAGCGTAAAATAGGCTGTCCAGTCTCTATTGCCAATCCATTTCTA
CATATGGGGCTTTCGCCACAAATTGATCAAAAGAAACTTAAAAATGATGCGCCATCTTTATTAACTGCATGTGGTTTGGC
ATTGAGGAGCTTCGATCCATGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	60.795	99.717	0.606
pilM	Acinetobacter baumannii D1279779	60.795	99.717	0.606
comM	Acinetobacter baylyi ADP1	58.523	99.717	0.584
pilM	Legionella pneumophila strain ERS1305867	37.892	99.433	0.377