Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   AB895_RS03995 Genome accession   NZ_CP021342
Coordinates   852627..853010 (-) Length   127 a.a.
NCBI ID   WP_000389061.1    Uniprot ID   A0AA36K9J0
Organism   Acinetobacter baumannii strain B8342     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 847627..858010
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB895_RS03980 (AB895_0799) - 849519..851597 (-) 2079 WP_000505931.1 methyl-accepting chemotaxis protein -
  AB895_RS03985 (AB895_0800) - 851644..852180 (-) 537 WP_000729762.1 chemotaxis protein CheW -
  AB895_RS03990 (AB895_0801) pilH 852241..852603 (-) 363 WP_000101096.1 PleD family two-component system response regulator Machinery gene
  AB895_RS03995 (AB895_0802) pilG 852627..853010 (-) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  AB895_RS04000 (AB895_0803) - 853168..854100 (-) 933 WP_002122868.1 IS5 family transposase -
  AB895_RS04005 (AB895_0804) - 854342..854980 (+) 639 WP_032059038.1 hypothetical protein -
  AB895_RS04010 (AB895_0805) - 855040..856158 (+) 1119 WP_032059039.1 efflux RND transporter periplasmic adaptor subunit -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14200.23 Da        Isoelectric Point: 4.5762

>NTDB_id=192809 AB895_RS03995 WP_000389061.1 852627..853010(-) (pilG) [Acinetobacter baumannii strain B8342]
MEDAFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=192809 AB895_RS03995 WP_000389061.1 852627..853010(-) (pilG) [Acinetobacter baumannii strain B8342]
ATGGAAGATGCATTCCAAAATCTGAAAGTAATGGTTATTGATGACTCAAAAACTATTCGCCGTACCGCAGAAACTCTATT
GCAACGCGAAGGTTGCGAAGTGATTACTGCTGTCGATGGATTTGAAGCTTTATCTAAAATTGCTGAAGCGAATCCGGATA
TTGTTTTTGTAGATATCATGATGCCTCGTTTAGACGGTTATCAAACTTGTGCTTTGATTAAGAACTCTCAAAATTATCAG
AACATTCCCGTTATCATGCTCTCTAGTAAAGATGGTTTATTTGATCAGGCAAAAGGGCGTGTGGTAGGTTCAGATGAATA
CTTGACGAAACCTTTTAGCAAAGATGAATTGCTAAATGCGATTCGTAATCATGTAAGTTCATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AA36K9J0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

100

100

1
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37

Multiple sequence alignment